y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00016406m |
Family | GH1 |
Protein Properties | Length: 506 Molecular Weight: 57453 Isoelectric Point: 6.6966 |
Chromosome | Chromosome/Scaffold: 063766 Start: 648 End: 3861 |
Description | beta glucosidase 40 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 44 | 504 | 0 |
SVLQYEGAVKEDGRGKTTWDTFAHTFGKIVDFSNADVAVDQYHRFEEDIQLMADMGMDAYRFSIAWSRILPNGIGQVNQAGIDHYNKLIDALLAKGIEPY VTLYHWDLPQTLEDRYNGWLDRQIVNDLAAYAEICFKAFGDRVKHWITLNEPHTVAIQGYDDGLQAPGRCSLLLHLYCKAGNSGTEPYIVAHNFILAHAT VSDIYRRNYKATQNGELGIAFDVMWFEPMTNTTIDIEAAKRGQEFQLGWFADPFFFGDYPASMRSRVGDRLPKFTEDEAALVKGALDFVGINHYTTYYTK HNSTNIIGRLLHNTLADTGTISLPFRNGKPIGDRANSIWLYIVPSGMRSLMNYVKERYNNPPIYITENGMDDGNGPFTSIKDALKDSKRIKYHNDYLTNL AASIKEDGCDVRGYFAWSLLDNWEWTAGYSSRFGLYFVDYKDNLKRYPKSSVQWFKALLSS |
Full Sequence |
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Protein Sequence Length: 506 Download |
MTILPLTMES RGFGSCFCCL CGRQPDRFVQ GRRSSLVTSV LFCSVLQYEG AVKEDGRGKT 60 TWDTFAHTFG KIVDFSNADV AVDQYHRFEE DIQLMADMGM DAYRFSIAWS RILPNGIGQV 120 NQAGIDHYNK LIDALLAKGI EPYVTLYHWD LPQTLEDRYN GWLDRQIVND LAAYAEICFK 180 AFGDRVKHWI TLNEPHTVAI QGYDDGLQAP GRCSLLLHLY CKAGNSGTEP YIVAHNFILA 240 HATVSDIYRR NYKATQNGEL GIAFDVMWFE PMTNTTIDIE AAKRGQEFQL GWFADPFFFG 300 DYPASMRSRV GDRLPKFTED EAALVKGALD FVGINHYTTY YTKHNSTNII GRLLHNTLAD 360 TGTISLPFRN GKPIGDRANS IWLYIVPSGM RSLMNYVKER YNNPPIYITE NGMDDGNGPF 420 TSIKDALKDS KRIKYHNDYL TNLAASIKED GCDVRGYFAW SLLDNWEWTA GYSSRFGLYF 480 VDYKDNLKRY PKSSVQWFKA LLSSK* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 9.0e-141 | 44 | 505 | 467 | + beta-glucosidase | ||
PLN02998 | PLN02998 | 8.0e-143 | 44 | 502 | 460 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 7.0e-145 | 44 | 503 | 462 | + beta-glucosidase | ||
TIGR03356 | BGL | 6.0e-159 | 47 | 498 | 456 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 3.0e-176 | 47 | 505 | 462 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3GNO | 0 | 22 | 504 | 15 | 488 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase |
GenBank | EEC74750.1 | 0 | 22 | 504 | 48 | 521 | hypothetical protein OsI_10506 [Oryza sativa Indica Group] |
GenBank | EEE58575.1 | 0 | 22 | 504 | 48 | 521 | hypothetical protein OsJ_09895 [Oryza sativa Japonica Group] |
RefSeq | NP_001049358.1 | 0 | 22 | 504 | 48 | 521 | Os03g0212800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002465651.1 | 0 | 43 | 504 | 45 | 507 | hypothetical protein SORBIDRAFT_01g043030 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 22 | 504 | 15 | 488 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
PDB | 3gnp_A | 0 | 22 | 504 | 15 | 488 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
PDB | 3gno_A | 0 | 22 | 504 | 15 | 488 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3ptq_B | 0 | 33 | 502 | 31 | 503 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3ptq_A | 0 | 33 | 502 | 31 | 503 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO467354 | 280 | 84 | 363 | 0 |
EE190553 | 266 | 207 | 472 | 0 |
CB673495 | 261 | 42 | 302 | 0 |
CD445171 | 253 | 83 | 335 | 0 |
HO777739 | 439 | 70 | 505 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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