| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00016853m |
| Family | GH47 |
| Protein Properties | Length: 296 Molecular Weight: 33705.2 Isoelectric Point: 5.2478 |
| Chromosome | Chromosome/Scaffold: 064397 Start: 706 End: 2241 |
| Description | alpha-mannosidase 3 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH47 | 3 | 284 | 0 |
| SPSSGQFSGENIRLGSRGDSYYEYLLKVWIQQEENRDSSLKYLFEMYTEAMRGVKHLLVRKTVPNELVFVGELPFGRNGDFSPKMDHLVCFLPGTLALGA TKGITKKKALENNLLTDEDIENLQLAEDLAKTCVEMYFVTSTGLAPEIAYFHIEGNQEGGPDGGYKSNKYVNDIIIKPLDRHNLLRPETVESLFVLHRIT EDPKYREWGWQIFQAFEKHTKVDSGGYSSLDDVTSLPPHRRDKMETFFLGETLKYLYLLFDESNTLPLDKYVFNTEAHPLPV | |||
| Full Sequence |
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| Protein Sequence Length: 296 Download |
| MCSPSSGQFS GENIRLGSRG DSYYEYLLKV WIQQEENRDS SLKYLFEMYT EAMRGVKHLL 60 VRKTVPNELV FVGELPFGRN GDFSPKMDHL VCFLPGTLAL GATKGITKKK ALENNLLTDE 120 DIENLQLAED LAKTCVEMYF VTSTGLAPEI AYFHIEGNQE GGPDGGYKSN KYVNDIIIKP 180 LDRHNLLRPE TVESLFVLHR ITEDPKYREW GWQIFQAFEK HTKVDSGGYS SLDDVTSLPP 240 HRRDKMETFF LGETLKYLYL LFDESNTLPL DKYVFNTEAH PLPVMRSVEQ ASHSV* 300 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PTZ00470 | PTZ00470 | 2.0e-97 | 3 | 284 | 282 | + glycoside hydrolase family 47 protein; Provisional |
| pfam01532 | Glyco_hydro_47 | 2.0e-122 | 3 | 284 | 283 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAT01383.1 | 0 | 2 | 295 | 408 | 701 | putative alpha-mannosidase [Oryza sativa Japonica Group] |
| GenBank | EAY96947.1 | 0 | 2 | 295 | 408 | 701 | hypothetical protein OsI_18866 [Oryza sativa Indica Group] |
| RefSeq | NP_001054909.1 | 0 | 2 | 295 | 352 | 645 | Os05g0209100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001148788.1 | 0 | 2 | 295 | 349 | 642 | LOC100282405 [Zea mays] |
| RefSeq | XP_002440782.1 | 0 | 2 | 295 | 349 | 642 | hypothetical protein SORBIDRAFT_09g006500 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1fmi_A | 0 | 6 | 284 | 208 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo3_A | 0 | 6 | 284 | 208 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo2_A | 0 | 6 | 284 | 208 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1x9d_A | 0 | 16 | 284 | 297 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 1dl2_A | 0 | 4 | 285 | 225 | 495 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FL793940 | 257 | 33 | 289 | 0 |
| BG837941 | 273 | 24 | 296 | 0 |
| GT041523 | 282 | 15 | 296 | 0 |
| JG903828 | 257 | 40 | 296 | 0 |
| JG961360 | 270 | 27 | 296 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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