| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00017045m |
| Family | CE10 |
| Protein Properties | Length: 372 Molecular Weight: 39276.6 Isoelectric Point: 7.0777 |
| Chromosome | Chromosome/Scaffold: 065053 Start: 1247 End: 2390 |
| Description | alpha/beta-Hydrolases superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE10 | 67 | 357 | 3.8e-36 |
| DTVPASTDPATGVASRDVVVDAAAGLAARLYLPSLAAANSTDGGARLPLLVFYHGGAFVTESAFSPTYHRYLNALASRARVLAVAALPAAYDDSWAALRW ALASARSPPGPGAGAADPWLSRHADPARLFLAGDSAGGNIAHNMAMRAGREGLLDGGAAAIRGLALLDPYFWGRRPVPSETRDEGTRRWREWTWSFVCAG RYGIDDPVINPVAMPPEEWRRLASARVLVTVAGLDLLSARGRAYVRALRASGWRGEVELYETPGEQHVYFLDKPDSEKAAKEMEVVADFIN | |||
| Full Sequence |
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| Protein Sequence Length: 372 Download |
| MAAVGGRLSS AVLLLLNMAG ALLAPRGALP PGPPAAGAGA EDDVDFFFFP FLVLYKSGRV 60 QRFMGTDTVP ASTDPATGVA SRDVVVDAAA GLAARLYLPS LAAANSTDGG ARLPLLVFYH 120 GGAFVTESAF SPTYHRYLNA LASRARVLAV AALPAAYDDS WAALRWALAS ARSPPGPGAG 180 AADPWLSRHA DPARLFLAGD SAGGNIAHNM AMRAGREGLL DGGAAAIRGL ALLDPYFWGR 240 RPVPSETRDE GTRRWREWTW SFVCAGRYGI DDPVINPVAM PPEEWRRLAS ARVLVTVAGL 300 DLLSARGRAY VRALRASGWR GEVELYETPG EQHVYFLDKP DSEKAAKEME VVADFINNGG 360 QGSSAALRMD A* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0657 | Aes | 7.0e-8 | 190 | 358 | 173 | + Esterase/lipase [Lipid metabolism] | ||
| pfam07859 | Abhydrolase_3 | 2.0e-21 | 189 | 337 | 155 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD09342.1 | 0 | 18 | 371 | 1 | 356 | putative PrMC3 [Oryza sativa Japonica Group] |
| GenBank | EAZ07331.1 | 0 | 24 | 371 | 21 | 370 | hypothetical protein OsI_29580 [Oryza sativa Indica Group] |
| RefSeq | NP_001062031.1 | 0 | 37 | 371 | 34 | 370 | Os08g0474800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001063398.1 | 0 | 26 | 358 | 44 | 379 | Os09g0462100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002445635.1 | 0 | 52 | 371 | 54 | 396 | hypothetical protein SORBIDRAFT_07g023070 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ed1_F | 1e-32 | 69 | 357 | 52 | 348 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
| PDB | 3ed1_E | 1e-32 | 69 | 357 | 52 | 348 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
| PDB | 3ed1_D | 1e-32 | 69 | 357 | 52 | 348 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
| PDB | 3ed1_C | 1e-32 | 69 | 357 | 52 | 348 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
| PDB | 3ed1_B | 1e-32 | 69 | 357 | 52 | 348 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
| isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
