Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00017496m |
Family | GH9 |
Protein Properties | Length: 479 Molecular Weight: 50744.1 Isoelectric Point: 6.8969 |
Chromosome | Chromosome/Scaffold: 053394 Start: 2979 End: 5001 |
Description | glycosyl hydrolase 9B12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 34 | 473 | 0 |
DYRAALSNSLLYFEGRRSGKLPANQRVQWRGDSAVDLTGGYYDSGDNVKFGLPMAFTVTMLAWGVVEYARPLAAAGELRNALAAVRWGADYLARAHAAEE TLYVQVGDGDSDHSCWQRPEDMDTPRTAYSVDASRPGSDAAAETTAALAAAAVAFRRLDAGYSASLLGHAEQLFRFAKNRRGLYHNSVPGAGEFYPSSGD EDELIWAAVWLFVATGREDYKAFIAGDGNGGEVQSTLSWDKKFLGAQAQLILEGKLPDAGNPAAMKRSLEQFFCNVVQHGAKLSPGGMLWVQPWNNMQYV TSAAFVAAAHADHLAGASLRCGGGAALPPPQLLSFARSQVDYILGANPGRMSYMVGYGPRFPAEVHHRGSSVPSIKSSPGKITCKGGFDYFSKSTPKPNV LVGAIVGGPDGNDHYNDSRQNFQLAEPSTVTVAPIVGVLA |
Full Sequence |
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Protein Sequence Length: 479 Download |
MGSMVRQLLA AAGLAALCCL GGCAISSSDG GQPDYRAALS NSLLYFEGRR SGKLPANQRV 60 QWRGDSAVDL TGGYYDSGDN VKFGLPMAFT VTMLAWGVVE YARPLAAAGE LRNALAAVRW 120 GADYLARAHA AEETLYVQVG DGDSDHSCWQ RPEDMDTPRT AYSVDASRPG SDAAAETTAA 180 LAAAAVAFRR LDAGYSASLL GHAEQLFRFA KNRRGLYHNS VPGAGEFYPS SGDEDELIWA 240 AVWLFVATGR EDYKAFIAGD GNGGEVQSTL SWDKKFLGAQ AQLILEGKLP DAGNPAAMKR 300 SLEQFFCNVV QHGAKLSPGG MLWVQPWNNM QYVTSAAFVA AAHADHLAGA SLRCGGGAAL 360 PPPQLLSFAR SQVDYILGAN PGRMSYMVGY GPRFPAEVHH RGSSVPSIKS SPGKITCKGG 420 FDYFSKSTPK PNVLVGAIVG GPDGNDHYND SRQNFQLAEP STVTVAPIVG VLARLLHN* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00759 | Glyco_hydro_9 | 2.0e-145 | 34 | 473 | 460 | + Glycosyl hydrolase family 9. | ||
PLN02613 | PLN02613 | 4.0e-149 | 31 | 476 | 463 | + endoglucanase | ||
PLN02171 | PLN02171 | 6.0e-150 | 30 | 475 | 472 | + endoglucanase | ||
PLN02340 | PLN02340 | 3.0e-150 | 34 | 475 | 468 | + endoglucanase | ||
PLN00119 | PLN00119 | 0 | 34 | 475 | 459 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI25463.1 | 0 | 34 | 475 | 24 | 482 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001054543.1 | 0 | 9 | 476 | 1 | 510 | Os05g0129200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002269618.1 | 0 | 34 | 475 | 24 | 480 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002272408.1 | 0 | 34 | 475 | 24 | 479 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002440523.1 | 0 | 6 | 475 | 5 | 482 | hypothetical protein SORBIDRAFT_09g002490 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 34 | 476 | 4 | 429 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 1ksc_A | 0 | 34 | 476 | 4 | 429 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 1ks8_A | 0 | 34 | 476 | 4 | 429 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 34 | 477 | 5 | 442 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 34 | 477 | 5 | 442 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |