Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00017654m |
Family | GH100 |
Protein Properties | Length: 414 Molecular Weight: 47145.9 Isoelectric Point: 5.1028 |
Chromosome | Chromosome/Scaffold: 053358 Start: 840 End: 2792 |
Description | Plant neutral invertase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH100 | 1 | 386 | 0 |
SWEKTVDCYSPGQGLMPASFKIRTVPLDENNEGFEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYCKITGDYDLLERVDVQTGIQLILSLCLSDGFDMF PTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREMLVVNDGSKTLIRAVNNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSHEATNKFNIYPEQ IPSWLVDWIPEKGGYLIGNLQPAHMDFRFFSLGNLWAIASSLTTPRQAEGILSLIEEKWDDLVANMPLKICYPAMEDDEWRIITGSDPKNTPWSYHNGGS WPTLLWQFTLACIKMGRPELARRAVALAEERLSDDKWPEYYDTRSGRFIGKQSRSYQTWTIAGFLTSKMLLENPELASILTCDEDL |
Full Sequence |
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Protein Sequence Length: 414 Download |
SWEKTVDCYS PGQGLMPASF KIRTVPLDEN NEGFEEVLDP DFGEAAIGRV APVDSGLWWI 60 ILLRAYCKIT GDYDLLERVD VQTGIQLILS LCLSDGFDMF PTLLVTDGSC MIDRRMGIHG 120 HPLEIQALFY SALRCSREML VVNDGSKTLI RAVNNRLSAL SFHIREYYWV DMKKINEIYR 180 YKTEEYSHEA TNKFNIYPEQ IPSWLVDWIP EKGGYLIGNL QPAHMDFRFF SLGNLWAIAS 240 SLTTPRQAEG ILSLIEEKWD DLVANMPLKI CYPAMEDDEW RIITGSDPKN TPWSYHNGGS 300 WPTLLWQFTL ACIKMGRPEL ARRAVALAEE RLSDDKWPEY YDTRSGRFIG KQSRSYQTWT 360 IAGFLTSKML LENPELASIL TCDEDLELLE GCACCLSKKR ARCSRRAAKS HAG* 420 |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam06202 | GDE_C | 0.0003 | 53 | 317 | 284 | + Amylo-alpha-1,6-glucosidase. This family includes human glycogen branching enzyme. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (EC:3.2.1.33). |
PLN02973 | PLN02973 | 2.0e-169 | 1 | 388 | 388 | + beta-fructofuranosidase |
PLN03005 | PLN03005 | 9.0e-171 | 2 | 385 | 384 | + beta-fructofuranosidase |
pfam12899 | Glyco_hydro_100 | 0 | 1 | 374 | 374 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. |
PLN02703 | PLN02703 | 0 | 1 | 389 | 389 | + beta-fructofuranosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004135 | amylo-alpha-1,6-glucosidase activity |
GO:0005978 | glycogen biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAO25633.1 | 0 | 1 | 412 | 214 | 625 | invertase [Oryza sativa Indica Group] |
GenBank | ACN34188.1 | 0 | 1 | 413 | 214 | 626 | unknown [Zea mays] |
GenBank | EAY73839.1 | 0 | 1 | 412 | 208 | 619 | hypothetical protein OsI_01715 [Oryza sativa Indica Group] |
RefSeq | NP_001042931.1 | 0 | 1 | 412 | 215 | 626 | Os01g0332100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002455584.1 | 0 | 1 | 413 | 215 | 627 | hypothetical protein SORBIDRAFT_03g013420 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO811217 | 391 | 1 | 391 | 0 |
HO779905 | 384 | 8 | 391 | 0 |
DV161952 | 315 | 3 | 317 | 0 |
CJ722898 | 284 | 34 | 317 | 0 |
GT033923 | 322 | 47 | 368 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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