Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00017689m |
Family | GT4 |
Protein Properties | Length: 1074 Molecular Weight: 118812 Isoelectric Point: 6.6438 |
Chromosome | Chromosome/Scaffold: 047741 Start: 115 End: 5683 |
Description | sucrose phosphate synthase 3F |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 483 | 651 | 0 |
TNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKGV FINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDITTALNNGLLVDPHDQNAIADALLKLVADKNLWQE |
Full Sequence |
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Protein Sequence Length: 1074 Download |
MAGNEWINGY LEAILDSRTA PGGGGGGGGG GGGDPKSPVA GASPRGPHMN FNPTHYFVEE 60 VVKGVDESDL HRTWIKVVAT RNARERSTRL ENMCWRIWHL ARKKKQLELE GLQRMSARRK 120 EQEQVRREAT EDLAEDLSEA ADTLGELVPV EMAKKKFQRN FSDLTVWSDD NKEKKLYIVL 180 ISVHGLVRGE NMELGRDSDT GGQVKYVVEL ARALSMMPGV YRVDLFTRQV SSPDVDWSYG 240 EPTEMLTTSS IDGEGMGESG GAYIVRIPCG PRDKYLKKEA LWPYLQEFVD GALGHILNMS 300 KALGEQVGNG RPVLPYVIHG HYADAGDVAA LLSGALNVPM VLTGHSLGRN KLEQLLKQGR 360 MSKEDIDSTY KIMRRIEGEE LALDASELVI TSTRQEIDEQ WGLYDGFDVK LEKVLRARAR 420 RGVSCHGRFM PRMVVIPPGM DFSNVFPEDI DGDGDGKDDI ISLEGASPKS MPPIWAEVMR 480 FLTNPHKPMI LALSRPDPKK NITTLVKAFG ECRPLRELAN LTLIMGNRDD IDEMSAGNAS 540 VLTTVLKLID KYDLYGSVAF PKHHNQADVP EIYRLAAKMK GVFINPALVE PFGLTLIEAA 600 AHGLPIVATK NGGPVDITTA LNNGLLVDPH DQNAIADALL KLVADKNLWQ ECRRNGLRNI 660 HLYSWPEHCR TYLTRIAGCR LRNPRWLKDT PADAGADEEE LLEDSMDAQD LSLRLSIDGE 720 KNSLSINEPL SSDPQDQVQK IMNKIKQSSA LPPSLSSVSE GGKNAAEAAG SVVNKYPVLR 780 RRRRLFVIAV DCYQDDGRAS KKMLQVIQEV FRAVRSDSQM SKISGFALST AMPLSETLQL 840 LQLGKIQATD FDALICGSGS EVYYPGTSHC IDAEGKLRPD QDYLLHISHR WSHDGARQTI 900 AKLMVAQDGS GDVVEQDVAS SNEHCVSFLI KDTKKVKTID EMRERLRMRG LRCHIMYCRN 960 STRLQVIPLL ASRSQALRYL FVRWGLSVGN MYLITGEHGD TDQEEMLSGL HKTVILRGVT 1020 EKGSEALLRS SGSYHRTDVV PSESPLVSYT AGDLKADEIM RALKQVSKTS SGM* 1080 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00142 | PLN00142 | 4.0e-37 | 178 | 665 | 545 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 1.0e-49 | 178 | 674 | 541 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03800 | GT1_Sucrose_synthase | 4.0e-160 | 177 | 674 | 499 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
TIGR02472 | sucr_P_syn_N | 1.0e-178 | 176 | 673 | 499 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
TIGR02468 | sucrsPsyn_pln | 0 | 1 | 1067 | 1084 | + sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
Swiss-Prot | A2WYE9 | 0 | 1 | 1073 | 1 | 1084 | SPS_ORYSI RecName: Full=Probable sucrose-phosphate synthase; AltName: Full=UDP-glucose-fructose-phosphate glucosyltransferase |
DDBJ | BAA19241.1 | 0 | 30 | 1073 | 1 | 1047 | Sucrose-Phosphate Synthase [Saccharum officinarum] |
GenBank | EEC72045.1 | 0 | 1 | 1073 | 1 | 1100 | hypothetical protein OsI_04951 [Oryza sativa Indica Group] |
RefSeq | NP_001105694.1 | 0 | 1 | 1073 | 1 | 1068 | sucrose phosphate synthase1 [Zea mays] |
RefSeq | XP_002458991.1 | 0 | 1 | 1073 | 1 | 1081 | hypothetical protein SORBIDRAFT_03g043900 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2r68_A | 0 | 199 | 676 | 31 | 456 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 2r66_A | 0 | 199 | 676 | 31 | 456 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 2r60_A | 0 | 199 | 676 | 31 | 456 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
PDB | 3s29_H | 3.00004e-41 | 178 | 674 | 281 | 764 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
PDB | 3s29_G | 3.00004e-41 | 178 | 674 | 281 | 764 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
sucrose biosynthesis | SUCROSE-PHOSPHATE-SYNTHASE-RXN | EC-2.4.1.14 | sucrose-phosphate synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO796578 | 414 | 172 | 583 | 0 |
HO796578 | 85 | 570 | 654 | 1.99965e-42 |
HO796578 | 24 | 663 | 686 | 1.99965e-42 |
HO796578 | 40 | 65 | 104 | 8e-31 |
HO796578 | 81 | 99 | 175 | 8e-31 |
Sequence Alignments (This image is cropped. Click for full image.) |
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