| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00017930m |
| Family | GT66 |
| Protein Properties | Length: 721 Molecular Weight: 80801.1 Isoelectric Point: 9.0452 |
| Chromosome | Chromosome/Scaffold: 049701 Start: 520 End: 5242 |
| Description | staurosporin and temperature sensitive 3-like b |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT66 | 28 | 669 | 0 |
| RVSALALIYVLAFAVRLFSVLRYESMIHEFDPYFNYRTTLFLSENGFSEFWNWFDFESWYPLGRVVGGTLFPGLMVTAALLHRLLRALSLAVHIREVCVL TAPFFAANTTLVAYAFGREIWDSGAGLVAAALIAIVPGYISRSVAGSYDNEGVAIFALLLTFYLFVRAVNTGSLAWALASAFGYFYMVSAWGGYVFIINL VPLYVLVLLVTGRYSQRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLLQVFFFLDWVKYLLNDARLFKSFLRITLTCVITVGTLALGIG TASGYISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKRLSDATIFIVMYGLTSMYFAGVMVRLILVAAPAVCLI SAIAASATIKNLTTLIRTKSKSPQATSGKTTGSKAAAKGAVDQSLPFQHNAAIVLLLGAFYLLSRYAIHCTWVTSEAYSSPSIVLAARGHNGGRVIFDDY REAYYWLRQNTPPDAKIMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMQSLDVNYVLVVFGGVTGYSSDDINKFLWMVRIGGG VFPVIKEPDYLVNGEYRVDKGAAPKMLNCLMYKLCYYRFGEL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 721 Download |
| MATTALDFLP APLRSLRLKT KQQELLLRVS ALALIYVLAF AVRLFSVLRY ESMIHEFDPY 60 FNYRTTLFLS ENGFSEFWNW FDFESWYPLG RVVGGTLFPG LMVTAALLHR LLRALSLAVH 120 IREVCVLTAP FFAANTTLVA YAFGREIWDS GAGLVAAALI AIVPGYISRS VAGSYDNEGV 180 AIFALLLTFY LFVRAVNTGS LAWALASAFG YFYMVSAWGG YVFIINLVPL YVLVLLVTGR 240 YSQRLYVAYN CMYVLGMLLA MQIRFVGFQH VQSGEHMAAM GVFFLLQVFF FLDWVKYLLN 300 DARLFKSFLR ITLTCVITVG TLALGIGTAS GYISPWTGRF YSLLDPTYAK DHIPIIASVS 360 EHQPTAWSSF MFDFHILLFL FPAGLYFCFK RLSDATIFIV MYGLTSMYFA GVMVRLILVA 420 APAVCLISAI AASATIKNLT TLIRTKSKSP QATSGKTTGS KAAAKGAVDQ SLPFQHNAAI 480 VLLLGAFYLL SRYAIHCTWV TSEAYSSPSI VLAARGHNGG RVIFDDYREA YYWLRQNTPP 540 DAKIMSWWDY GYQITAMGNR TVIVDNNTWN NTHIATVGRA MSSYEDEAYE IMQSLDVNYV 600 LVVFGGVTGY SSDDINKFLW MVRIGGGVFP VIKEPDYLVN GEYRVDKGAA PKMLNCLMYK 660 LCYYRFGELT TEYGKPPGYD RVRGVEIGNK DIKLEYLEEA FTTSNWIVRI YKVKPPKNRS 720 * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR04154 | archaeo_STT3 | 2.0e-21 | 29 | 602 | 639 | + oligosaccharyl transferase, archaeosortase A system-associated. Members of this protein family occur, one to three members per genome, in the same species of Euryarchaeota as contain the predicted protein-sorting enzyme archaeosortase (TIGR04125) and its cognate protein-sorting signal PGF-CTERM (TIGR04126). | ||
| COG1287 | COG1287 | 8.0e-66 | 9 | 718 | 756 | + Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only] | ||
| pfam02516 | STT3 | 4.0e-133 | 26 | 671 | 663 | + Oligosaccharyl transferase STT3 subunit. This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes, OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone, rather than in an OTase complex, and is required for N-glycosylation of asparagines. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004576 | oligosaccharyl transferase activity |
| GO:0006486 | protein glycosylation |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN29281.1 | 0 | 1 | 720 | 1 | 719 | unknown [Zea mays] |
| EMBL | CBG76274.1 | 0 | 12 | 720 | 14 | 707 | OO_Ba0005L10-OO_Ba0081K17.25 [Oryza officinalis] |
| RefSeq | NP_001054248.1 | 0 | 2 | 720 | 3 | 721 | Os04g0675500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001131374.1 | 0 | 1 | 720 | 1 | 720 | hypothetical protein LOC100192699 [Zea mays] |
| RefSeq | XP_002448765.1 | 0 | 1 | 720 | 1 | 720 | hypothetical protein SORBIDRAFT_06g032800 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2lgz_A | 0 | 496 | 714 | 20 | 238 | A Chain A, Solution Structure Of Stt3p |
| PDB | 3vu0_C | 0.0000009 | 526 | 642 | 6 | 123 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vu0_B | 0.0000009 | 526 | 642 | 6 | 123 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vu0_A | 0.0000009 | 526 | 642 | 6 | 123 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vgp_A | 0.00003 | 525 | 626 | 6 | 113 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
