Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00017954m |
Family | GT31 |
Protein Properties | Length: 382 Molecular Weight: 42992.1 Isoelectric Point: 8.3142 |
Chromosome | Chromosome/Scaffold: 051371 Start: 1007 End: 4468 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 147 | 325 | 0 |
KRRDSIRNTWMPQGEMRKKLEEEKGIIIRFVIGHSAISGGIVDRAIEAEDKKHGDFMRLDHVEGYLELSGKTRTYFATAVALWDANFYVKVDDDVHVNIA TLGNILSKHILKPRVYIGCMKSGPVLSDKDVRYYEPEHWKFGEVGNKYFRHATGQLYAISKDLATYISINKHVLHKYIN |
Full Sequence |
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Protein Sequence Length: 382 Download |
MSWRRGGGAG ADGVARRWVL LLCVGSFCLG LLFTNRMWTL PEASEIAIPN ERKGKESELM 60 AGDCSIRKVQ GKRDYGDMLH MSDTHHDAQT LDKTIANLET ELSAARTLQD SFLNGSPVSE 120 EYKASESTGR RKYLMVIGIN TAFSSRKRRD SIRNTWMPQG EMRKKLEEEK GIIIRFVIGH 180 SAISGGIVDR AIEAEDKKHG DFMRLDHVEG YLELSGKTRT YFATAVALWD ANFYVKVDDD 240 VHVNIATLGN ILSKHILKPR VYIGCMKSGP VLSDKDVRYY EPEHWKFGEV GNKYFRHATG 300 QLYAISKDLA TYISINKHVL HKYINEMFLW DLDCEWKAQA GNTCAASFDW KCSGICNSVQ 360 NIWGVHKKCS EGEKALLTAS F* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03133 | PLN03133 | 0.0005 | 115 | 310 | 214 | + beta-1,3-galactosyltransferase; Provisional | ||
pfam13334 | DUF4094 | 2.0e-28 | 18 | 107 | 91 | + Domain of unknown function (DUF4094). This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. | ||
pfam01762 | Galactosyl_T | 5.0e-50 | 147 | 326 | 185 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03193 | PLN03193 | 0 | 18 | 381 | 389 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG42389.1 | 0 | 1 | 351 | 1 | 370 | beta-1,3-galactosyltransferase sqv-2 [Zea mays] |
RefSeq | NP_001058369.1 | 0 | 1 | 381 | 1 | 395 | Os06g0679500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001136834.1 | 0 | 1 | 381 | 1 | 401 | hypothetical protein LOC100216983 [Zea mays] |
RefSeq | XP_002437448.1 | 0 | 1 | 381 | 1 | 400 | hypothetical protein SORBIDRAFT_10g027290 [Sorghum bicolor] |
RefSeq | XP_002451594.1 | 0 | 1 | 381 | 1 | 402 | hypothetical protein SORBIDRAFT_04g004400 [Sorghum bicolor] |