| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00018047m |
| Family | AA1 |
| Protein Properties | Length: 542 Molecular Weight: 59286 Isoelectric Point: 5.083 |
| Chromosome | Chromosome/Scaffold: 050708 Start: 598 End: 3014 |
| Description | laccase 7 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 119 | 526 | 0 |
| YPFPKPHGEETVLLGEWWNANVEDLDRMAFRTGNTPPNADAYTINGKPGDFYNCPNANQTYRFQVQRNETYLLRIINAALNTPMFFKVANHSFTVVGADA VYTTPYETDVVVIAPGQTVDALMDTGAPVGRYYMATSPYDSAIPQGPPFSRTTGTAVVEYVGSAGEETPQLPSRPDYNDTNTAFRFFSNLTALVLPGKPT VPLSVDTRMFVTIGLGNSDCQPAQLLCNTSGTRQPIFSSSMNNASFVLPDSVSMLQAHYANASAGVYTRDFPDQPPVIFDYTADASDTATLKYTTKSTKV KTLRYNETVEMVLQNTRLIAKESHPMHLHGFNFFVLAQGFGNYDPATATPQFNLVNPQERNTVAVPTGGWAVIRFVANNPGMWFMHCHFDAHLDLGLGMV FEVQDGPT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 542 Download |
| MARSWSPVLP CGLLAFLLAY VAQAAVVEHT FNVGNLSISQ LCRPAMIITA VNGQLPGPTI 60 EAREGDTVVV HLVNESPYDM TIHWHGIFQR GTPWADGPAM VTQCPVKPGG NYTYCFNAYP 120 FPKPHGEETV LLGEWWNANV EDLDRMAFRT GNTPPNADAY TINGKPGDFY NCPNANQTYR 180 FQVQRNETYL LRIINAALNT PMFFKVANHS FTVVGADAVY TTPYETDVVV IAPGQTVDAL 240 MDTGAPVGRY YMATSPYDSA IPQGPPFSRT TGTAVVEYVG SAGEETPQLP SRPDYNDTNT 300 AFRFFSNLTA LVLPGKPTVP LSVDTRMFVT IGLGNSDCQP AQLLCNTSGT RQPIFSSSMN 360 NASFVLPDSV SMLQAHYANA SAGVYTRDFP DQPPVIFDYT ADASDTATLK YTTKSTKVKT 420 LRYNETVEMV LQNTRLIAKE SHPMHLHGFN FFVLAQGFGN YDPATATPQF NLVNPQERNT 480 VAVPTGGWAV IRFVANNPGM WFMHCHFDAH LDLGLGMVFE VQDGPTLETS VPPPPFDLPQ 540 C* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07731 | Cu-oxidase_2 | 2.0e-42 | 388 | 525 | 141 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02604 | PLN02604 | 1.0e-62 | 13 | 520 | 569 | + oxidoreductase | ||
| PLN02191 | PLN02191 | 1.0e-69 | 13 | 519 | 567 | + L-ascorbate oxidase | ||
| TIGR03388 | ascorbase | 3.0e-79 | 26 | 520 | 560 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 24 | 541 | 552 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA97328.1 | 0 | 21 | 541 | 100 | 657 | laccase family protein, putative [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC78752.1 | 0 | 28 | 541 | 26 | 576 | hypothetical protein OsI_18967 [Oryza sativa Indica Group] |
| GenBank | EEE53032.1 | 0 | 28 | 541 | 32 | 557 | hypothetical protein OsJ_35752 [Oryza sativa Japonica Group] |
| RefSeq | NP_001066518.1 | 0 | 28 | 541 | 26 | 576 | Os12g0259800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002442097.1 | 0 | 6 | 541 | 7 | 576 | hypothetical protein SORBIDRAFT_08g011530 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 47 | 519 | 23 | 521 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3) |
| PDB | 1asq_A | 0 | 47 | 519 | 23 | 521 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3) |
| PDB | 1asp_B | 0 | 47 | 519 | 23 | 521 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3) |
| PDB | 1asp_A | 0 | 47 | 519 | 23 | 521 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3) |
| PDB | 1aso_B | 0 | 47 | 519 | 23 | 521 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3) |
