Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00018213m |
Family | GT20 |
Protein Properties | Length: 822 Molecular Weight: 92776.8 Isoelectric Point: 5.4822 |
Chromosome | Chromosome/Scaffold: 047937 Start: 2175 End: 5845 |
Description | trehalose-phosphatase/synthase 7 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT20 | 1 | 488 | 0 |
LPVVARRRADGRGWVFSWDEDSLLLRLRDGVPDEMEVFFVGSLRADVPPAEQDEVSQTLIDGFRCAPVFLSPELNERFYHHFCKGYLWPLFHYMLPFAAQ LSPATEAAPSSDGGRFDRSAWEAYVLANKHFYEKVVEVINPEDDYIWVHDYHLMALPTFLRRRFNRLRIGFFLHSPFPSSEIYRTLPVREEVLRTLLNCD LIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYFGRTVGIKIMPMGIHMGQLQSVLRLPEQEQKVAELRQRFEGKSVLLGVDDTDIFKGINLKLLAF ETMLRMHPKWQGRAVLVQIANPPRGKGKELETIQAEIRVTCERINRDFGQTGYSPVVFIDRNVPSAERLAYYTIAECVVVTAVRDGMNLTPYEYIVCRQG IPGSESAPEVSGPKKSMLVVSEFIGCSPSLSGAIRINPWNIETTAEALNEAISVSEQEKQLRHGKHYRYVSTHDVSYWSRSFVQDLER |
Full Sequence |
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Protein Sequence Length: 822 Download |
LPVVARRRAD GRGWVFSWDE DSLLLRLRDG VPDEMEVFFV GSLRADVPPA EQDEVSQTLI 60 DGFRCAPVFL SPELNERFYH HFCKGYLWPL FHYMLPFAAQ LSPATEAAPS SDGGRFDRSA 120 WEAYVLANKH FYEKVVEVIN PEDDYIWVHD YHLMALPTFL RRRFNRLRIG FFLHSPFPSS 180 EIYRTLPVRE EVLRTLLNCD LIGFHTFDYA RHFLSCCSRM LGLEYQSKRG YIGLEYFGRT 240 VGIKIMPMGI HMGQLQSVLR LPEQEQKVAE LRQRFEGKSV LLGVDDTDIF KGINLKLLAF 300 ETMLRMHPKW QGRAVLVQIA NPPRGKGKEL ETIQAEIRVT CERINRDFGQ TGYSPVVFID 360 RNVPSAERLA YYTIAECVVV TAVRDGMNLT PYEYIVCRQG IPGSESAPEV SGPKKSMLVV 420 SEFIGCSPSL SGAIRINPWN IETTAEALNE AISVSEQEKQ LRHGKHYRYV STHDVSYWSR 480 SFVQDLERAC KDHFRKPCWG IGLGFGFRVV ALDPHFSKLN LDTIVMSYEK AKSRAILLDY 540 DGTLVPQASI NKEPSAEIVS IINTLCSDSN NIVSIVSGRS RDSLGPMFAS CPKLGLAAEH 600 GYFLRWTRDE EWQTITRTSD FGWMQMAEPV MNLYTEATDG SYIETKETAL VWHHQDADPG 660 FGSSQAKEML DHLESVLANE PVAVKSGQFI VEVKPQGVSK GLVAEKILTL MKEKGRQADF 720 VLCIGDDRSD EDMFENIADV MKRNIVAPKT PLFACTVGQK PSKARFYLDD TFEVVNMLSS 780 LADASDPDPI IELEDDLATS VSSIDISDEP PKLGNRRDEG S* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03063 | PLN03063 | 2.0e-168 | 1 | 786 | 828 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PLN02205 | PLN02205 | 0 | 1 | 786 | 796 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
pfam00982 | Glyco_transf_20 | 0 | 1 | 488 | 492 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
PRK14501 | PRK14501 | 0 | 48 | 784 | 745 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
cd03788 | GT1_TPS | 0 | 1 | 487 | 487 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC79533.1 | 0 | 14 | 821 | 97 | 899 | hypothetical protein OsI_20637 [Oryza sativa Indica Group] |
GenBank | EEE64369.1 | 0 | 1 | 821 | 82 | 899 | hypothetical protein OsJ_19211 [Oryza sativa Japonica Group] |
RefSeq | NP_001056050.1 | 0 | 1 | 821 | 82 | 899 | Os05g0517200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002440081.1 | 0 | 1 | 821 | 84 | 906 | hypothetical protein SORBIDRAFT_09g025660 [Sorghum bicolor] |
RefSeq | XP_002458490.1 | 0 | 1 | 821 | 86 | 910 | hypothetical protein SORBIDRAFT_03g034640 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gz5_D | 0 | 70 | 488 | 67 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_C | 0 | 70 | 488 | 67 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_B | 0 | 70 | 488 | 67 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_A | 0 | 70 | 488 | 67 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 2wtx_D | 0 | 70 | 488 | 68 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777775 | 783 | 14 | 786 | 0 |
HO779327 | 524 | 34 | 555 | 0 |
HO779327 | 243 | 551 | 789 | 0 |
HO795511 | 479 | 318 | 796 | 0 |
HO797286 | 472 | 320 | 786 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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