y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00018247m |
Family | CE10 |
Protein Properties | Length: 297 Molecular Weight: 31953.5 Isoelectric Point: 8.6966 |
Chromosome | Chromosome/Scaffold: 052661 Start: 30 End: 1001 |
Description | carboxyesterase 18 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 42 | 289 | 0 |
LPGRLGGPAPLPVVVFFHGGGFALFSAASRPYDNLCRRLCRGVGAVVVSVNYRLVPEHRYPAAYDDGVAALRYLDSIALPGGLAPVPVDLSSCFLAGDSS GGNMVHHVAQRWAASMSATSSSSSPPPRLRLAGAVRIQPFFGGEERTGAELALDKACRILTVARADGYWREFLAEGATRDHPAARVCGDGVELAEAFPLA MVAVGGFDLLKDWHVRDYVETLRRKGRAVSVVEYPDAFHGFYAFPELA |
Full Sequence |
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Protein Sequence Length: 297 Download |
MPSLPWTVSI QAAAYAFAHR LDGSIRRSLF RLGDRKKAAK PLPGRLGGPA PLPVVVFFHG 60 GGFALFSAAS RPYDNLCRRL CRGVGAVVVS VNYRLVPEHR YPAAYDDGVA ALRYLDSIAL 120 PGGLAPVPVD LSSCFLAGDS SGGNMVHHVA QRWAASMSAT SSSSSPPPRL RLAGAVRIQP 180 FFGGEERTGA ELALDKACRI LTVARADGYW REFLAEGATR DHPAARVCGD GVELAEAFPL 240 AMVAVGGFDL LKDWHVRDYV ETLRRKGRAV SVVEYPDAFH GFYAFPELAD SGKLVED 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00135 | COesterase | 0.0005 | 57 | 95 | 39 | + Carboxylesterase family. | ||
cd00312 | Esterase_lipase | 4.0e-6 | 59 | 148 | 100 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
PRK10162 | PRK10162 | 1.0e-9 | 57 | 145 | 89 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 1.0e-25 | 57 | 286 | 230 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 9.0e-51 | 57 | 283 | 227 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ04907.1 | 0 | 2 | 297 | 8 | 322 | hypothetical protein OsI_27088 [Oryza sativa Indica Group] |
GenBank | EAZ04908.1 | 0 | 4 | 297 | 17 | 331 | hypothetical protein OsI_27089 [Oryza sativa Indica Group] |
RefSeq | NP_001060440.1 | 0 | 4 | 297 | 17 | 331 | Os07g0643100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001060441.1 | 0 | 2 | 297 | 20 | 340 | Os07g0643400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002463274.1 | 0 | 2 | 297 | 19 | 356 | hypothetical protein SORBIDRAFT_02g041000 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2zsi_A | 0 | 40 | 287 | 106 | 333 | A Chain A, Structure Of Berberine Bridge Enzyme In Complex With Dehydroscoulerine |
PDB | 2zsh_A | 0 | 40 | 287 | 106 | 333 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 1.4013e-45 | 51 | 297 | 111 | 342 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_E | 1.4013e-45 | 51 | 297 | 111 | 342 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_D | 1.4013e-45 | 51 | 297 | 111 | 342 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL771953 | 223 | 76 | 297 | 0 |
EE172342 | 242 | 57 | 297 | 0 |
FL771954 | 194 | 105 | 297 | 0 |
EG394784 | 235 | 57 | 288 | 0 |
EE162385 | 220 | 79 | 297 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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