y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00018291m |
Family | GH5 |
Protein Properties | Length: 524 Molecular Weight: 57434.1 Isoelectric Point: 4.662 |
Chromosome | Chromosome/Scaffold: 050612 Start: 1119 End: 4248 |
Description | |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 232 | 510 | 1.49939e-42 |
QVLRNHWSTYITESDFSFIASSGLNAVRVPVGWWIASDPDPPLPFVGGSLQALDNAFSWAEKYNLGVIVDLHAAPGSQNPYEHSATRDGSQEWGTSDANI AQTVQVIEFLASRYAGRASLLAVELLNEPLAPGATLASIMKYYQDGYDAVRRHTSTAYVIMSNRLSASATELLQFAGGFSGAVLDVHYYNLFSSDFDSLT VEQNIDFVRNNRSSDLAAVTSQNGRPLTFVGEWVAEWEVQGATKTDYQRFAQVQEDVYGRATFGWAYWTLKNVNNHWSM |
Full Sequence |
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Protein Sequence Length: 524 Download |
MRSADAGILG RVRLPLLLLL LICSSLLLLP QQSDARRTLA AAGAPASPIR AVNLGGWLLT 60 EGWIQGNSLF NDIPNNDLLD GTQLQFKSVT QNRYLVADMG GGAAILADRV NASGWETFKL 120 WRIDEMTFNF RVFGNQFVGV NSTGGVVATA TTPGPSETFQ LVRQDSDKSR VRIRASNGLF 180 LQAKTMESVT ADYGEDSDWG DDDPSVFVTN NVGSLHGEYQ ICNGYGVTKA TQVLRNHWST 240 YITESDFSFI ASSGLNAVRV PVGWWIASDP DPPLPFVGGS LQALDNAFSW AEKYNLGVIV 300 DLHAAPGSQN PYEHSATRDG SQEWGTSDAN IAQTVQVIEF LASRYAGRAS LLAVELLNEP 360 LAPGATLASI MKYYQDGYDA VRRHTSTAYV IMSNRLSASA TELLQFAGGF SGAVLDVHYY 420 NLFSSDFDSL TVEQNIDFVR NNRSSDLAAV TSQNGRPLTF VGEWVAEWEV QGATKTDYQR 480 FAQVQEDVYG RATFGWAYWT LKNVNNHWSM QWMIQNGYIT LNT* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 2.0e-14 | 237 | 503 | 278 | + Cellulase (glycosyl hydrolase family 5). | ||
COG2730 | BglC | 1.0e-26 | 209 | 518 | 349 | + Endoglucanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ15852.1 | 0 | 23 | 523 | 13 | 473 | hypothetical protein OsJ_31271 [Oryza sativa Japonica Group] |
GenBank | EEE50844.1 | 0 | 45 | 522 | 420 | 895 | hypothetical protein OsJ_31274 [Oryza sativa Japonica Group] |
RefSeq | NP_001064458.1 | 0 | 23 | 523 | 13 | 510 | Os10g0370500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002440848.1 | 0 | 42 | 522 | 57 | 538 | hypothetical protein SORBIDRAFT_09g008170 [Sorghum bicolor] |
RefSeq | XP_002464704.1 | 0 | 28 | 523 | 26 | 516 | hypothetical protein SORBIDRAFT_01g024390 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1eqp_A | 2e-37 | 218 | 517 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 2pc8_A | 5e-37 | 218 | 517 | 51 | 382 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
PDB | 2pb1_A | 5e-37 | 218 | 517 | 51 | 382 | A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A |
PDB | 2pbo_A | 5e-37 | 218 | 517 | 51 | 382 | A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A |
PDB | 1eqc_A | 6e-37 | 218 | 517 | 45 | 376 | A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A |