y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00018777m |
Family | GT20 |
Protein Properties | Length: 865 Molecular Weight: 97596.6 Isoelectric Point: 6.6656 |
Chromosome | Chromosome/Scaffold: 052978 Start: 1524 End: 5113 |
Description | trehalose-phosphatase/synthase 9 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT20 | 59 | 546 | 0 |
KRKIVAANFLPLNCMKDEATGEWSFAMDDNQLLVQLKDGFPIDSEVIYVGSLNVQVHPSEQDQVSQKLFKEHKCIPTFLPADLQQQFYHRFCKQHLWPLF HYMLPVCHDKGELFDRSLFQAYVRANKIFADKVMEAVTLNDDYVWVHDYHLMLVPTFLRKKLHQIKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNADLI GFQTFDYARHFLSCCSRLLGLNYESKRGHIGIEYFGRTVSLKILAAGVHVGRLESMLKLPATMSKVQEIENIYRGKLVILGVDDMDIFKGISLKLLGLEL LLKRTPKLRGKVVLVQIVNPARSIGKDIEEANNEAISVAQRINDTYGSANYRPVVLIDYLIPFYEKIAYYVASDCCIVNAVRDGMNLIPYEYTVCRQGNE EIDKLRGADKSSLHTSTLIVSEFVGCSPSLSGAFRVNPWSVEDVADALYSATDLTQYEKIQRHEKHYRYVKYHDVAYWARSFDQDLQR |
Full Sequence |
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Protein Sequence Length: 865 Download |
MVLNSYPNLL DICSEDASDF QQPLRSLPCT VTSPSNTSGP DWESSNGSDL VGSAPSCLKR 60 KIVAANFLPL NCMKDEATGE WSFAMDDNQL LVQLKDGFPI DSEVIYVGSL NVQVHPSEQD 120 QVSQKLFKEH KCIPTFLPAD LQQQFYHRFC KQHLWPLFHY MLPVCHDKGE LFDRSLFQAY 180 VRANKIFADK VMEAVTLNDD YVWVHDYHLM LVPTFLRKKL HQIKVGFFLH SPFPSSEIYR 240 TLPVRDEILK SLLNADLIGF QTFDYARHFL SCCSRLLGLN YESKRGHIGI EYFGRTVSLK 300 ILAAGVHVGR LESMLKLPAT MSKVQEIENI YRGKLVILGV DDMDIFKGIS LKLLGLELLL 360 KRTPKLRGKV VLVQIVNPAR SIGKDIEEAN NEAISVAQRI NDTYGSANYR PVVLIDYLIP 420 FYEKIAYYVA SDCCIVNAVR DGMNLIPYEY TVCRQGNEEI DKLRGADKSS LHTSTLIVSE 480 FVGCSPSLSG AFRVNPWSVE DVADALYSAT DLTQYEKIQR HEKHYRYVKY HDVAYWARSF 540 DQDLQRTCKE QYSRRCWTTG FGLNFRVIAL SPGFRRLSLE LFASSYKKAN KRVIFLDYDG 600 TLVPQSSLNK APSAELISIL NNLCNDTKNI VFVVSGRGRN SLCEWFDSCE NLGIAAEHGY 660 FIRWSRAAEW EVSSLCQCSE WKLIADPIMH VYTETTDGSS IERKESALVW HYQNTDHDFG 720 SCQAKELVGH LERVLANEPV VVKRGHQIVE VKPRGVSKGI AVDKIIRTLV NNGEVPDLLM 780 CIGNDRSDED MFESINKATS YTDLPAIPEI FACSVGPKAS KANYYVDGCS EVIRLLKGVT 840 VVSSQMDAAS HSHVSPKDIL EVVN* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03063 | PLN03063 | 5.0e-149 | 60 | 846 | 827 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
cd03788 | GT1_TPS | 3.0e-169 | 62 | 545 | 484 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. | ||
PRK14501 | PRK14501 | 9.0e-180 | 101 | 838 | 754 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
PLN02205 | PLN02205 | 0 | 1 | 845 | 853 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
pfam00982 | Glyco_transf_20 | 0 | 59 | 546 | 492 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG24200.1 | 0 | 1 | 864 | 1 | 864 | trehalose 6-phosphate synthase [Zea mays] |
GenBank | ACN34016.1 | 0 | 1 | 864 | 1 | 864 | unknown [Zea mays] |
RefSeq | NP_001061805.1 | 0 | 1 | 863 | 1 | 861 | Os08g0414700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002445486.1 | 0 | 1 | 864 | 1 | 865 | hypothetical protein SORBIDRAFT_07g020270 [Sorghum bicolor] |
RefSeq | XP_002462305.1 | 0 | 1 | 864 | 1 | 861 | hypothetical protein SORBIDRAFT_02g023610 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gz5_D | 0 | 117 | 546 | 43 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_C | 0 | 117 | 546 | 43 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_B | 0 | 117 | 546 | 43 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_A | 0 | 117 | 546 | 43 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1uqu_B | 0 | 117 | 546 | 44 | 453 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777775 | 780 | 81 | 854 | 0 |
HO779327 | 513 | 101 | 613 | 0 |
HO779327 | 231 | 609 | 839 | 0 |
HO797286 | 479 | 377 | 855 | 0 |
JG952206 | 266 | 489 | 754 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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