Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00018830m |
Family | GT14 |
Protein Properties | Length: 266 Molecular Weight: 29178.6 Isoelectric Point: 9.9193 |
Chromosome | Chromosome/Scaffold: 053290 Start: 2809 End: 4617 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT14 | 90 | 266 | 0 |
IAYLISGSAGDGAALRRTLRALYHPANTYVVHLDLEAPAAERAELAAAVRADPVYARFRNVRVVTRANLVTYRGPTMVANTLHAAAILLREGGDWDWFIN LSASDYPLVTQDDLLHVLSELPRQLNFIEHTSDIGWKEYQRAKPVIIDPGLYSLQKSDVFWITEKRSVPTAFKLFTG |
Full Sequence |
---|
Protein Sequence Length: 266 Download |
MLEAKPPSPG SGAAAHIHGH RRWAAPLLAS LLLSSLLISA SLFFSSSRAL LLSFSPLPTA 60 ASAEPLFVEA KLRQQMRAGE RPPPPAVPRI AYLISGSAGD GAALRRTLRA LYHPANTYVV 120 HLDLEAPAAE RAELAAAVRA DPVYARFRNV RVVTRANLVT YRGPTMVANT LHAAAILLRE 180 GGDWDWFINL SASDYPLVTQ DDLLHVLSEL PRQLNFIEHT SDIGWKEYQR AKPVIIDPGL 240 YSLQKSDVFW ITEKRSVPTA FKLFTG |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-41 | 90 | 266 | 177 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 8.0e-90 | 65 | 266 | 203 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG48118.1 | 0 | 21 | 266 | 25 | 270 | acetylglucosaminyltransferase [Zea mays] |
GenBank | ACN29023.1 | 0 | 43 | 266 | 47 | 270 | unknown [Zea mays] |
GenBank | EAZ01579.1 | 0 | 1 | 266 | 1 | 274 | hypothetical protein OsI_23613 [Oryza sativa Indica Group] |
RefSeq | NP_001130420.1 | 0 | 16 | 266 | 19 | 269 | hypothetical protein LOC100191516 [Zea mays] |
RefSeq | XP_002437247.1 | 0 | 21 | 266 | 25 | 270 | hypothetical protein SORBIDRAFT_10g023480 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.000000007 | 104 | 208 | 99 | 197 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.000000007 | 104 | 208 | 99 | 197 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.000000007 | 104 | 208 | 99 | 197 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.000000007 | 104 | 208 | 99 | 197 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00000002 | 104 | 208 | 99 | 197 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EE038441 | 228 | 16 | 243 | 0 |
DV524362 | 224 | 16 | 239 | 0 |
CA192852 | 181 | 82 | 262 | 0 |
FL864035 | 166 | 101 | 266 | 0 |
GR997969 | 202 | 65 | 266 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|