| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00018938m |
| Family | GT31 |
| Protein Properties | Length: 228 Molecular Weight: 25928.4 Isoelectric Point: 4.9335 |
| Chromosome | Chromosome/Scaffold: 047699 Start: 2568 End: 4471 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT31 | 5 | 174 | 0 |
| TGLTFRFVAVRPKDKQKMEDLQKEADMHHDFLFIDADEDTKPPQKMLAFFKTAYHMFDAEFYVKADDDIYLRPDRLAALLAKERPEHRTYVGCMKKGPVV NDPNMKWYESSWDLLGNEYFVHASGSLYALSSEVVEAVATAKSESLRMFDYEDVTVGAWMLAMNVKHEDN | |||
| Full Sequence |
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| Protein Sequence Length: 228 Download |
| LEHGTGLTFR FVAVRPKDKQ KMEDLQKEAD MHHDFLFIDA DEDTKPPQKM LAFFKTAYHM 60 FDAEFYVKAD DDIYLRPDRL AALLAKERPE HRTYVGCMKK GPVVNDPNMK WYESSWDLLG 120 NEYFVHASGS LYALSSEVVE AVATAKSESL RMFDYEDVTV GAWMLAMNVK HEDNRAMCDP 180 TCTPSSIAVW DKKCSGSCNI TEKIKQLHNT TLCSKSPTLP PEVEEEE* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00210 | PTZ00210 | 0.0006 | 48 | 173 | 137 | + UDP-GlcNAc-dependent glycosyltransferase; Provisional | ||
| PLN03133 | PLN03133 | 3.0e-6 | 63 | 167 | 113 | + beta-1,3-galactosyltransferase; Provisional | ||
| pfam01762 | Galactosyl_T | 3.0e-32 | 4 | 175 | 180 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03193 | PLN03193 | 2.0e-37 | 1 | 208 | 223 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY96877.1 | 0 | 22 | 200 | 1 | 180 | hypothetical protein OsI_18800 [Oryza sativa Indica Group] |
| RefSeq | NP_001054878.1 | 0 | 1 | 226 | 164 | 390 | Os05g0199500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001131152.1 | 0 | 1 | 227 | 148 | 375 | hypothetical protein LOC100192460 [Zea mays] |
| RefSeq | XP_002279252.1 | 0 | 1 | 222 | 136 | 359 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002440764.1 | 0 | 1 | 227 | 148 | 375 | hypothetical protein SORBIDRAFT_09g006190 [Sorghum bicolor] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CO444120 | 223 | 1 | 221 | 0 |
| FF582720 | 192 | 31 | 221 | 0 |
| GT828013 | 187 | 36 | 221 | 0 |
| DR803779 | 170 | 51 | 219 | 0 |
| FL981449 | 146 | 76 | 221 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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