Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00019037m |
Family | AA6 |
Protein Properties | Length: 184 Molecular Weight: 19063.9 Isoelectric Point: 8.4619 |
Chromosome | Chromosome/Scaffold: 052161 Start: 1095 End: 1882 |
Description | Quinone reductase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA6 | 6 | 175 | 0 |
KIYIVYYSTYGHVAALAEEIRRGAASVAGVEAKLWQRAGVPAIAPAELVEADGVLFGFPTRFGMLPAQMKAFLDGTSGLWCEQRLAGKPAGIFCSSACQG GGQDFLAHHGMLFVPVGYTFGAGMFEMGEVKGGSPYGAGTVAGDGSRVPTHLELQQAFHQGKYFAGIAKK |
Full Sequence |
---|
Protein Sequence Length: 184 Download |
MATTTKIYIV YYSTYGHVAA LAEEIRRGAA SVAGVEAKLW QRAGVPAIAP AELVEADGVL 60 FGFPTRFGML PAQMKAFLDG TSGLWCEQRL AGKPAGIFCS SACQGGGQDF LAHHGMLFVP 120 VGYTFGAGMF EMGEVKGGSP YGAGTVAGDG SRVPTHLELQ QAFHQGKYFA GIAKKLKGPA 180 AAA* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0426 | FpaA | 2.0e-5 | 3 | 111 | 113 | + Uncharacterized flavoproteins [Energy production and conversion] | ||
pfam03358 | FMN_red | 2.0e-12 | 19 | 123 | 130 | + NADPH-dependent FMN reductase. | ||
COG0655 | WrbA | 4.0e-29 | 5 | 169 | 198 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
TIGR01755 | flav_wrbA | 5.0e-42 | 5 | 168 | 190 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
PRK03767 | PRK03767 | 3.0e-55 | 5 | 168 | 192 | + NAD(P)H:quinone oxidoreductase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0009055 | electron carrier activity |
GO:0010181 | FMN binding |
GO:0016491 | oxidoreductase activity |
GO:0050662 | coenzyme binding |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19740.1 | 0 | 3 | 178 | 4 | 204 | unknown [Glycine max] |
EMBL | CAD31838.1 | 0 | 4 | 178 | 3 | 202 | putative quinone oxidoreductase [Cicer arietinum] |
RefSeq | NP_001044464.1 | 0 | 6 | 180 | 4 | 203 | Os01g0784800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001060966.1 | 0 | 6 | 180 | 4 | 203 | Os08g0139200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002534445.1 | 0 | 5 | 180 | 3 | 203 | Minor allergen Alt a, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4dy4_C | 7.00649e-45 | 6 | 178 | 2 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 4dy4_A | 7.00649e-45 | 6 | 178 | 2 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6m_B | 7.00649e-45 | 6 | 178 | 3 | 198 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6m_A | 7.00649e-45 | 6 | 178 | 3 | 198 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6k_B | 7.00649e-45 | 6 | 178 | 3 | 198 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EV017258 | 194 | 1 | 169 | 0 |
GR049308 | 190 | 5 | 169 | 0 |
EV551435 | 194 | 1 | 169 | 0 |
FY458485 | 191 | 4 | 169 | 0 |
GR009887 | 190 | 5 | 169 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|