y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00019371m |
Family | GH1 |
Protein Properties | Length: 402 Molecular Weight: 46903 Isoelectric Point: 6.4598 |
Chromosome | Chromosome/Scaffold: 028090 Start: 559 End: 3450 |
Description | beta glucosidase 13 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 6 | 390 | 0 |
GGINYNGLQYYRNLINTLKENGIEPYLTIFHWNTPQALEDKYGSFLDRRIVKDYTDFAKVCFEHFGDKVKHWFTFNEPQNFCSYAYGSGQHAPGRCSPEH NCAIPCGDLLREPYRVGHNILLAHAEVAHLYNNYYKGEDGHIGLAIDSMFYKPYAKTFLDEQAKERSIDFCLGWFMEPLFRGEYPFAMRSLLGHRLPYFK DDEQEKLVGSYNMMGLNYYTSLFCEHVDISPGHSPMDNTQDAYATPKFVDHEGNHIGPETGYQWIRSYPKGLKDLLMIIKDKYGNQPIYITENRTADFDD GNLSMKEVLDDGLRLDYLQRHISAVKESIEHFPFIQTMIFLKKSLLDNFEWAKGYTCRFGLIYVDRNDGFKRYMKKSAKWFSEFN |
Full Sequence |
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Protein Sequence Length: 402 Download |
EGTLEGGINY NGLQYYRNLI NTLKENGIEP YLTIFHWNTP QALEDKYGSF LDRRIVKDYT 60 DFAKVCFEHF GDKVKHWFTF NEPQNFCSYA YGSGQHAPGR CSPEHNCAIP CGDLLREPYR 120 VGHNILLAHA EVAHLYNNYY KGEDGHIGLA IDSMFYKPYA KTFLDEQAKE RSIDFCLGWF 180 MEPLFRGEYP FAMRSLLGHR LPYFKDDEQE KLVGSYNMMG LNYYTSLFCE HVDISPGHSP 240 MDNTQDAYAT PKFVDHEGNH IGPETGYQWI RSYPKGLKDL LMIIKDKYGN QPIYITENRT 300 ADFDDGNLSM KEVLDDGLRL DYLQRHISAV KESIEHFPFI QTMIFLKKSL LDNFEWAKGY 360 TCRFGLIYVD RNDGFKRYMK KSAKWFSEFN SAPRKVINDD KH 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 9.0e-78 | 6 | 389 | 388 | + beta-glucosidase | ||
COG2723 | BglB | 5.0e-79 | 5 | 388 | 390 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
PLN02849 | PLN02849 | 6.0e-83 | 6 | 389 | 387 | + beta-glucosidase | ||
TIGR03356 | BGL | 4.0e-85 | 1 | 386 | 387 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 4.0e-124 | 5 | 392 | 391 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD02839.1 | 0 | 1 | 398 | 158 | 554 | beta-D-glucosidase beta subunit precursor [Avena sativa] |
GenBank | ACG28509.1 | 0 | 1 | 396 | 94 | 489 | non-cyanogenic beta-glucosidase precursor [Zea mays] |
RefSeq | NP_001105892.1 | 0 | 1 | 397 | 158 | 559 | beta-D-glucosidase precursor [Zea mays] |
RefSeq | NP_001148152.1 | 0 | 1 | 396 | 154 | 549 | non-cyanogenic beta-glucosidase [Zea mays] |
RefSeq | XP_002442029.1 | 0 | 1 | 399 | 159 | 555 | hypothetical protein SORBIDRAFT_08g007570 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v02_E | 0 | 1 | 399 | 159 | 555 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 1v02_F | 0 | 1 | 399 | 159 | 555 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 1v02_D | 0 | 1 | 399 | 159 | 555 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 1v02_C | 0 | 1 | 399 | 159 | 555 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 1v02_B | 0 | 1 | 399 | 159 | 555 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
dhurrin degradation | RXN-9588 | EC-3.2.1 | dhurrinase2 β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FE644525 | 250 | 66 | 315 | 0 |
JG818704 | 250 | 63 | 312 | 0 |
FL760977 | 269 | 102 | 370 | 0 |
JK552983 | 242 | 63 | 304 | 0 |
FL765225 | 239 | 1 | 239 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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