Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00019455m |
Family | GT14 |
Protein Properties | Length: 497 Molecular Weight: 54009.1 Isoelectric Point: 9.0807 |
Chromosome | Chromosome/Scaffold: 028259 Start: 5993 End: 7786 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 141 | 392 | 0 |
LAYLISGSKGDLERLWRALHALYHPRNQYVVHLDREAPVSERLALAARVSNSTVFRRAGNVHVVHRANMVTYRGPTMVANTLHACAILLRRGGAWDWFIN LSASDYPLMTQDDILQVFSTVPSNVNFIEHTGYLGWKEGQRARPLIVDPGLYGSKKQDIFWASPKRELPTAFKLFTGSAWVALSRDFVEYTVWGWDNLPR TLLMYYANFVSSPEGYFQTLVCNAPRFVQTVANHDLHHIQWDVPPRQHPHAL |
Full Sequence |
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Protein Sequence Length: 497 Download |
MQANGRGEQH SPRSAAAGWP SPRGGGGEHY SPSPSKTPRG GAASPKLPAS AAWLVDSRWA 60 LSAALSLLLF LAVGLAVTSF SSSSSAPPYI SASAFFSSSD QAHHVHAADL VQEGVHVSQQ 120 QQQPESLASP PPPPGADLPR LAYLISGSKG DLERLWRALH ALYHPRNQYV VHLDREAPVS 180 ERLALAARVS NSTVFRRAGN VHVVHRANMV TYRGPTMVAN TLHACAILLR RGGAWDWFIN 240 LSASDYPLMT QDDILQVFST VPSNVNFIEH TGYLGWKEGQ RARPLIVDPG LYGSKKQDIF 300 WASPKRELPT AFKLFTGSAW VALSRDFVEY TVWGWDNLPR TLLMYYANFV SSPEGYFQTL 360 VCNAPRFVQT VANHDLHHIQ WDVPPRQHPH ALALADLPAM VRSGAPFARK FPRDDPVLDA 420 IDAELLGRPP PPRGGNGTAP AAAAATFVPG GWCGGDASCG GVDNDWVLRP GPGAERFQRL 480 IERIVRSEAF PNRQCK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 5.0e-77 | 143 | 387 | 248 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 143 | 496 | 354 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF87198.1 | 0 | 135 | 496 | 111 | 463 | unknown [Zea mays] |
DDBJ | BAH01648.1 | 0 | 29 | 496 | 19 | 480 | unnamed protein product [Oryza sativa Japonica Group] |
RefSeq | NP_001148073.1 | 0 | 135 | 491 | 111 | 458 | xylosyltransferase oxt [Zea mays] |
RefSeq | XP_002457166.1 | 0 | 1 | 496 | 1 | 490 | hypothetical protein SORBIDRAFT_03g002590 [Sorghum bicolor] |
RefSeq | XP_002457167.1 | 0 | 1 | 496 | 1 | 496 | hypothetical protein SORBIDRAFT_03g002600 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000000000002 | 152 | 425 | 96 | 381 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000000000002 | 152 | 425 | 96 | 381 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000000000002 | 152 | 425 | 96 | 381 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000000000002 | 152 | 425 | 96 | 381 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000000000007 | 152 | 425 | 96 | 381 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |