Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00019972m |
Family | GH100 |
Protein Properties | Length: 631 Molecular Weight: 70236 Isoelectric Point: 5.1559 |
Chromosome | Chromosome/Scaffold: 028338 Start: 2002 End: 5861 |
Description | Plant neutral invertase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH100 | 143 | 603 | 0 |
ETEAEREAWRLLRRAVVCYCGEPVGTVAAEDPESTETLNYDQVFIRDFVPSALAFLMRGETEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKIRTV PLDENNEGFEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYCKITGDYDLLERVDVQTGIQLILSLCLSDGFDMFPTLLVTDGSCMIDRRMGIHGHPLEI QALFYSALRCSREMLVVNDGSKNLIRAVNNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSHDATNKFNIYPEQIPSWLVDWIPEKGGYLIGNLQPAHM DFRFFSLGNLWAIASSLTTPRQAEGILSLIEEKWDDLVANMPLKICYPAMEDDEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRPELARRAV ALAEERLSDDKWPEYYDTRSGRFIGKQSRSYQTWTIAGFLTSKMLLENPELASILTCDEDL |
Full Sequence |
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Protein Sequence Length: 631 Download |
MNGQTPMGLA AAAAAAVRPC RRRLLSSASV AASKTGAGTA TPLFPRLPHP HHPPYGRRLP 60 FLVSAASQTG PDAPPTHTTG PVPSDPRAAV SGNLPFFDRV LFPDSFPIET PPAKEDEDAA 120 AASAPAPAQA DEAVAPAPPV REETEAEREA WRLLRRAVVC YCGEPVGTVA AEDPESTETL 180 NYDQVFIRDF VPSALAFLMR GETEIVRNFL LHTLQLQSWE KTVDCYSPGQ GLMPASFKIR 240 TVPLDENNEG FEEVLDPDFG EAAIGRVAPV DSGLWWIILL RAYCKITGDY DLLERVDVQT 300 GIQLILSLCL SDGFDMFPTL LVTDGSCMID RRMGIHGHPL EIQALFYSAL RCSREMLVVN 360 DGSKNLIRAV NNRLSALSFH IREYYWVDMK KINEIYRYKT EEYSHDATNK FNIYPEQIPS 420 WLVDWIPEKG GYLIGNLQPA HMDFRFFSLG NLWAIASSLT TPRQAEGILS LIEEKWDDLV 480 ANMPLKICYP AMEDDEWRII TGSDPKNTPW SYHNGGSWPT LLWQFTLACI KMGRPELARR 540 AVALAEERLS DDKWPEYYDT RSGRFIGKQS RSYQTWTIAG FLTSKMLLEN PELASILTCD 600 EDLELLEGCA CCLSKKRARC SRRAAKSHAG * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam06202 | GDE_C | 0.0007 | 270 | 534 | 284 | + Amylo-alpha-1,6-glucosidase. This family includes human glycogen branching enzyme. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (EC:3.2.1.33). | ||
pfam12899 | Glyco_hydro_100 | 0 | 151 | 591 | 441 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
PLN02703 | PLN02703 | 0 | 151 | 606 | 456 | + beta-fructofuranosidase | ||
PLN03005 | PLN03005 | 0 | 151 | 602 | 452 | + beta-fructofuranosidase | ||
PLN02973 | PLN02973 | 0 | 151 | 605 | 455 | + beta-fructofuranosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004135 | amylo-alpha-1,6-glucosidase activity |
GO:0005978 | glycogen biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAO25633.1 | 0 | 1 | 629 | 1 | 625 | invertase [Oryza sativa Indica Group] |
GenBank | ACN34188.1 | 0 | 1 | 630 | 1 | 626 | unknown [Zea mays] |
GenBank | EAY73839.1 | 0 | 7 | 629 | 1 | 619 | hypothetical protein OsI_01715 [Oryza sativa Indica Group] |
RefSeq | NP_001042931.1 | 0 | 1 | 629 | 1 | 626 | Os01g0332100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002455584.1 | 0 | 1 | 630 | 1 | 627 | hypothetical protein SORBIDRAFT_03g013420 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO811217 | 458 | 151 | 608 | 0 |
HO466454 | 460 | 151 | 610 | 0 |
HO779905 | 384 | 225 | 608 | 0 |
DV161952 | 315 | 220 | 534 | 0 |
CJ722898 | 284 | 251 | 534 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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