CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00020030m
FamilyGT13
Protein PropertiesLength: 432 Molecular Weight: 49789 Isoelectric Point: 7.648
ChromosomeChromosome/Scaffold: 028310 Start: 300 End: 7431
Descriptionalpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT13224260
  IQVRLFATQSHYADRLAEAEKSENQCTSQLKSLIDQVSMQQEKIVALEEMKIRQDEERAHLKILIQDLEKRSVQKLLNKNVVPVAAVVIMACNRPDYLER
  TVESILKYQTSVASKFPLFISQDGTNGAVKKKALDYKQITYMQHLNLEPVRTERPGELTAYYKIAKHYKWALDELFIKHNFARVIILEDDMEIAPDFFDY
  FEAAAKLLDNDKTIMAVSSWNDNGQKQFVNDPKALYRSDFFPGLGWMLTKSTWLELSPKLKEIHGNRQFIRPEICRTYNFGKHGSSLGQFFEQYLEPIKL
  NDVHIDWNSEDLSYLGEDKFSTKFGKEVASATPLHGSDAVLKAHSMAADVRIQYDDQEDFERIARQFGIFEEWKDGIPRTAYKGVVVFRYKSSRRRIFLV
  SPDSL
Full Sequence
Protein Sequence     Length: 432     Download
MARSPCDLRL LLLAATVAFI YIQVRLFATQ SHYADRLAEA EKSENQCTSQ LKSLIDQVSM    60
QQEKIVALEE MKIRQDEERA HLKILIQDLE KRSVQKLLNK NVVPVAAVVI MACNRPDYLE    120
RTVESILKYQ TSVASKFPLF ISQDGTNGAV KKKALDYKQI TYMQHLNLEP VRTERPGELT    180
AYYKIAKHYK WALDELFIKH NFARVIILED DMEIAPDFFD YFEAAAKLLD NDKTIMAVSS    240
WNDNGQKQFV NDPKALYRSD FFPGLGWMLT KSTWLELSPK LKEIHGNRQF IRPEICRTYN    300
FGKHGSSLGQ FFEQYLEPIK LNDVHIDWNS EDLSYLGEDK FSTKFGKEVA SATPLHGSDA    360
VLKAHSMAAD VRIQYDDQED FERIARQFGI FEEWKDGIPR TAYKGVVVFR YKSSRRRIFL    420
VSPDSLRQLG V* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00761Glyco_tranf_GTA_type0.004108241138+
cd06532Glyco_transf_250.00214923796+
cd02514GT13_GLCNAC-TI5.0e-155105425337+
pfam03071GNT-I015430433+
Gene Ontology
GO TermDescription
GO:0000139Golgi membrane
GO:0003827alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
GO:0006487protein N-linked glycosylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACF83572.1014311425unknown [Zea mays]
GenBankACG37957.1014311442N-acetylglucosaminyltransferase I [Zea mays]
RefSeqNP_001048631.1014311442Os02g0832800 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001142278.1014311442hypothetical protein LOC100274447 [Zea mays]
RefSeqXP_002441861.1014311442hypothetical protein SORBIDRAFT_08g003660 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1foa_A01054258339A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I
PDB1fo9_A01054258339A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I
PDB1fo8_A01054253334A Chain A, Crystal Structure Of N-Acetylglucosaminyltransferase I
PDB2apc_A01054252333A Chain A, Crystal Structure Of N-Acetylglucosaminyltransferase I
PDB2am5_A01054252333A Chain A, Crystal Structure Of N-Acetylglucosaminyltransferase I
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GO802527323293390
GO86578332983250
GO802714312293280
GT0474702951214040
GO87053031883130
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_007_00911.3Aquca_007_00911.4Aquca_007_00911.2Aquca_007_00911.1Aquca_007_00911.5
Arabidopsis lyrata912565490588
Arabidopsis thalianaAT4G38240.1AT4G38240.2AT4G38240.3
Brachypodium distachyonBradi3g60820.3Bradi3g60820.1Bradi3g60820.2
Brassica rapaBra033557
Carica papayaevm.TU.contig_28580.1.22.235evm.TU.contig_28580.1.235.387evm.TU.contig_28580.1.235.387evm.TU.contig_28580.1.22.235
Capsella rubellaCarubv10007540m
Citrus clementinaCiclev10028418m
Citrus sinensisorange1.1g019888morange1.1g012912morange1.1g012941m
Cucumis sativusCucsa.099720.1Cucsa.099720.2
Eucalyptus grandisEucgr.L00584.1Eucgr.L00583.1Eucgr.H04987.1Eucgr.H04987.2Eucgr.H04989.3
Eucgr.H04989.2Eucgr.H04989.4Eucgr.H04989.1
Fragaria vescamrna17328.1-v1.0-hybrid
Glycine maxGlyma04g00200.1Glyma06g00230.1
Gossypium raimondiiGorai.008G014000.2Gorai.008G014000.3Gorai.008G014000.1
Linum usitatissimumLus10022994Lus10001389
Malus domesticaMDP0000173465.283.435MDP0000170967.230.351MDP0000170967.22.209MDP0000170967.22.209MDP0000173465.283.435
MDP0000173465.22.268MDP0000173465.22.268MDP0000170967.230.351
Manihot esculentacassava4.1_024783m
Medicago truncatulaMedtr3g118520.1Medtr3g118520.2Medtr3g118520.3
Mimulus guttatusmgv1a006517mmgv1a006750m
Oryza sativaLOC_Os02g58590.1.304.426LOC_Os02g58590.1.304.426LOC_Os02g58590.1.22.283LOC_Os02g58590.1.22.283
Panicum virgatumPavirv00053907m
Physcomitrella patensPp1s100_54V6.1Pp1s246_61V6.1
Phaseolus vulgarisPhvul.009G115600.1
Picea abiesMA_901813g0010
Populus trichocarpaPotri.009G168000.2Potri.009G168000.1Potri.009G168000.4Potri.004G206900.3Potri.004G206900.1
Potri.004G206900.2Potri.009G168000.3
Prunus persicappa006221m
Ricinus communis29675.m000398.22.23129675.m000398.232.34829675.m000398.232.34829675.m000398.22.231
Setaria italicaSi006441mSi006440m
Selaginella moellendorffii268301
Sorghum bicolorSb08g003660.1
Thellungiella halophilaThhalv10025211mThhalv10025208mThhalv10025250m
Vitis viniferaGSVIVT01002028001GSVIVT01002907001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny