| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00020160m |
| Family | GT43 |
| Protein Properties | Length: 345 Molecular Weight: 39569.8 Isoelectric Point: 7.3931 |
| Chromosome | Chromosome/Scaffold: 028188 Start: 1455 End: 4752 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT43 | 215 | 309 | 1.8e-37 |
| LAHVLKAVQAPLLWLVVEWPEQSYETAEILRSSGVMYRHLICRKNTTSVRKIAVCQRNNAIYHVKKHHLDGIMHFADEERSYSADVFEEMQKIRS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 345 Download |
| MVSSRRSSGI IIREGSRNWS EFNDPSPSPK LLYSQSYVAM RGLVASVISL DFFLLSSKLK 60 SAWAGMTSHR HIRSQERSKS RGLNCKRVVV HLLLCFMVGI FIGFMPFFSV DVYKKIVSEN 120 ERLPFHESVV ETEMMDTKVK ELETVVVEKE VELIDEPEVG ESPPVPAMLD DEADFAESTR 180 ALPAIEDSDI SVKKLLIIVT ITSVRPQQAY YLNRLAHVLK AVQAPLLWLV VEWPEQSYET 240 AEILRSSGVM YRHLICRKNT TSVRKIAVCQ RNNAIYHVKK HHLDGIMHFA DEERSYSADV 300 FEEMQKIRSE QPHFFFAVPM IHNKLFEKFI DAILYRYYSF SPLA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03360 | Glyco_transf_43 | 1.0e-18 | 215 | 308 | 103 | + Glycosyltransferase family 43. | ||
| PLN02458 | PLN02458 | 1.0e-33 | 74 | 307 | 236 | + transferase, transferring glycosyl groups | ||
| cd00218 | GlcAT-I | 7.0e-46 | 194 | 308 | 121 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACL54619.1 | 0 | 1 | 308 | 1 | 299 | unknown [Zea mays] |
| GenBank | EEC79686.1 | 0 | 1 | 308 | 1 | 309 | hypothetical protein OsI_20954 [Oryza sativa Indica Group] |
| GenBank | EEE64667.1 | 0 | 1 | 308 | 1 | 309 | hypothetical protein OsJ_19521 [Oryza sativa Japonica Group] |
| RefSeq | NP_001056301.1 | 0 | 1 | 308 | 1 | 309 | Os05g0559600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001152042.1 | 0 | 1 | 308 | 1 | 299 | LOC100285679 [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v84_B | 0.00000005 | 198 | 308 | 7 | 131 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| PDB | 1v84_A | 0.00000005 | 198 | 308 | 7 | 131 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| PDB | 1v83_B | 0.00000005 | 198 | 308 | 7 | 131 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| PDB | 1v83_A | 0.00000005 | 198 | 308 | 7 | 131 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| PDB | 1v82_B | 0.00000005 | 198 | 308 | 7 | 131 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
