y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00020600m |
Family | GH1 |
Protein Properties | Length: 261 Molecular Weight: 30432.4 Isoelectric Point: 5.615 |
Chromosome | Chromosome/Scaffold: 0141200 Start: 1 End: 1918 |
Description | beta glucosidase 42 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 5 | 235 | 0 |
PYANTFLDEQAIERSIDFCLGWFMEPIYRGEYPFSMRSLLGHRLPYFKDDEKEKLVGSYNMMGLNYYTSLFCEHVDISPEFLPEVNTEDAYATPKFVDHE GNHIGPETGYQWIRSYPQGLKDLLMIIKNKYGNPPIYITENGTADFDDGHLSKKEELDDGLRLDYLQRHIAAVKESIDYGADVRGHFTWSLLDNFEWAKG YTCRFGIVYVDRDNGFKRTMKKSAKWFCDFN |
Full Sequence |
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Protein Sequence Length: 261 Download |
MFYKPYANTF LDEQAIERSI DFCLGWFMEP IYRGEYPFSM RSLLGHRLPY FKDDEKEKLV 60 GSYNMMGLNY YTSLFCEHVD ISPEFLPEVN TEDAYATPKF VDHEGNHIGP ETGYQWIRSY 120 PQGLKDLLMI IKNKYGNPPI YITENGTADF DDGHLSKKEE LDDGLRLDYL QRHIAAVKES 180 IDYGADVRGH FTWSLLDNFE WAKGYTCRFG IVYVDRDNGF KRTMKKSAKW FCDFNNTPRK 240 VINDKHRDLI ILNQALVSSN * 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 9.0e-42 | 1 | 234 | 235 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 4.0e-42 | 5 | 236 | 236 | + beta-glucosidase | ||
COG2723 | BglB | 3.0e-43 | 12 | 231 | 223 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 5.0e-58 | 5 | 231 | 227 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 4.0e-76 | 12 | 237 | 228 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1V02 | 0 | 5 | 245 | 316 | 556 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 1V03 | 0 | 5 | 245 | 316 | 556 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
GenBank | AAD02839.1 | 0 | 1 | 243 | 311 | 554 | beta-D-glucosidase beta subunit precursor [Avena sativa] |
RefSeq | XP_002442029.1 | 0 | 5 | 245 | 316 | 556 | hypothetical protein SORBIDRAFT_08g007570 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v02_F | 0 | 5 | 245 | 316 | 556 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 1v02_D | 0 | 5 | 245 | 316 | 556 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 1v02_C | 0 | 5 | 245 | 316 | 556 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 1v02_B | 0 | 5 | 245 | 316 | 556 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 1v02_A | 0 | 5 | 245 | 316 | 556 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
dhurrin degradation | RXN-9588 | EC-3.2.1 | dhurrinase2 β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL858663 | 260 | 2 | 261 | 0 |
FL895642 | 264 | 1 | 261 | 0 |
JG823506 | 246 | 1 | 246 | 0 |
JG967640 | 258 | 1 | 258 | 0 |
FL718760 | 228 | 34 | 261 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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