Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00020743m |
Family | GT8 |
Protein Properties | Length: 368 Molecular Weight: 42123.8 Isoelectric Point: 7.4743 |
Chromosome | Chromosome/Scaffold: 0144476 Start: 359 End: 2868 |
Description | galacturonosyltransferase 14 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 103 | 368 | 0 |
CLSLRLTDEYSSNAHARKQLPPPELLPLLSDNSFQHYILASDNILAASVVVSSTIRSSSVPEKVVFHVITDKKTYPGMHSWFALNSISPAIVEVKGVHQF DWLTRENVPVLEAIENHRGVRNHYHGDHGTVSSASDNPRVLASKLQARSPKYISLLNHLRIYLPELFPNLNKVVFLDDDIVVQRDLSPLWEINLEGKVNG AVETCRGEDNWVMSKRFRTYFNFSHPVISRSLDPDECAWAYGMNIFDLAAWRKTNIRDTYHFWLKE |
Full Sequence |
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Protein Sequence Length: 368 Download |
CLGRRIGPNF LGRQGGDSAR LVQDLYRIFD QVNNEESPSN EKLPESFRDF LLEMKDNHYD 60 ARTFAVRLKA TMESMDKEVK GSRLAEQLYK HYAATAIPKG IHCLSLRLTD EYSSNAHARK 120 QLPPPELLPL LSDNSFQHYI LASDNILAAS VVVSSTIRSS SVPEKVVFHV ITDKKTYPGM 180 HSWFALNSIS PAIVEVKGVH QFDWLTRENV PVLEAIENHR GVRNHYHGDH GTVSSASDNP 240 RVLASKLQAR SPKYISLLNH LRIYLPELFP NLNKVVFLDD DIVVQRDLSP LWEINLEGKV 300 NGAVETCRGE DNWVMSKRFR TYFNFSHPVI SRSLDPDECA WAYGMNIFDL AAWRKTNIRD 360 TYHFWLKE |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 1.0e-87 | 39 | 367 | 329 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 2.0e-95 | 51 | 365 | 317 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 5.0e-117 | 6 | 367 | 367 | + Probable galacturonosyltransferase | ||
PLN02659 | PLN02659 | 2.0e-152 | 1 | 368 | 370 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 0 | 1 | 368 | 369 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF94604.1 | 0 | 1 | 368 | 111 | 478 | Glycosyl transferase family 8 protein, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EEC74744.1 | 0 | 1 | 368 | 111 | 449 | hypothetical protein OsI_10497 [Oryza sativa Indica Group] |
RefSeq | NP_001049351.1 | 0 | 1 | 368 | 111 | 478 | Os03g0211800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002305374.1 | 0 | 1 | 368 | 66 | 433 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
RefSeq | XP_002324094.1 | 0 | 1 | 368 | 66 | 433 | glycosyltransferase [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.001 | 218 | 304 | 44 | 128 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.001 | 218 | 303 | 44 | 127 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.001 | 218 | 303 | 44 | 127 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GT033906 | 271 | 98 | 368 | 0 |
FL803210 | 263 | 7 | 269 | 0 |
GO850530 | 229 | 140 | 368 | 0 |
ES903477 | 285 | 85 | 368 | 0 |
ES305210 | 206 | 163 | 368 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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