| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00020834m |
| Family | GT20 |
| Protein Properties | Length: 875 Molecular Weight: 99041.5 Isoelectric Point: 5.8029 |
| Chromosome | Chromosome/Scaffold: 014206 Start: 4795 End: 10223 |
| Description | trehalose-phosphatase/synthase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT20 | 70 | 557 | 0 |
| AGDRLIVVANTLPVRGERRPDGRGWSFAWDEDSLLFHLRDGLPDDMEVLYVGSLRADVPPAEQDDVAQALLERFRCVPAFLPKDLCDRFYHGFCKQTLWP LFHYMLPFSPDHGGRFDRSQWEAYVLANKLFSQRVIEVLNPEDDYVWIHDYHLLALPSFLRRRFNRLRIGFFLHSPFPSSELYRSLPVRDEILKSLLNCD LIGFHTFDYARHFLSCCSRMLGIEYQSKRGYIGLDYFGRTVGIKIMPVGINMMQLQSLLQHPDLERQVAELRNQFNRKTVLLGVDDMDIFKGIDLKILAF EQMLKTHPKWQGRAVLVQIANPKGGSSKDLEELQAEIKESCQRINDQFGRPGYSPVVVINRMLSSIERMAYYTIAECVVVSAVRDGMNLTPYEYIVCRQG LAGLDDSGDNRPRGKSMLVVSEFIGCSPSLSGAIRVNPWNTDSTAEAMNECIALSDNEKQLRHEKHYRYVSSHDVSYWSKSFIHDFER | |||
| Full Sequence |
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| Protein Sequence Length: 875 Download |
| MFSRSYTNLL DLANGNLSAL DYGGGGGGGG GGRPPRARRM QRTMTTPGTL VELHEERAGS 60 VASDVQSSLA GDRLIVVANT LPVRGERRPD GRGWSFAWDE DSLLFHLRDG LPDDMEVLYV 120 GSLRADVPPA EQDDVAQALL ERFRCVPAFL PKDLCDRFYH GFCKQTLWPL FHYMLPFSPD 180 HGGRFDRSQW EAYVLANKLF SQRVIEVLNP EDDYVWIHDY HLLALPSFLR RRFNRLRIGF 240 FLHSPFPSSE LYRSLPVRDE ILKSLLNCDL IGFHTFDYAR HFLSCCSRML GIEYQSKRGY 300 IGLDYFGRTV GIKIMPVGIN MMQLQSLLQH PDLERQVAEL RNQFNRKTVL LGVDDMDIFK 360 GIDLKILAFE QMLKTHPKWQ GRAVLVQIAN PKGGSSKDLE ELQAEIKESC QRINDQFGRP 420 GYSPVVVINR MLSSIERMAY YTIAECVVVS AVRDGMNLTP YEYIVCRQGL AGLDDSGDNR 480 PRGKSMLVVS EFIGCSPSLS GAIRVNPWNT DSTAEAMNEC IALSDNEKQL RHEKHYRYVS 540 SHDVSYWSKS FIHDFERSCR DHFRRKCWGV GLGFGFRVVA LDRNFKRLTV DSIVEDYKKS 600 KSRVILLDYD GTLVPQTTMN KTPNETVVSM MNTLCADKKN VVFIVSGRGR DSLEKWFYPC 660 PELGIAAEHG YFMRWNRDEQ WQIQNQTSEF GWMHMAEPVM KLYTEATDGS YIETKESALV 720 WHHQDADPGF GSSQAKEMLD HLESVLANEP VSVKSGQHIV EVKPQAVSKG FVAEKILSTL 780 MEKGRQADFI LCIGDDRSDE DMFEKIADIM RRSMVDPQTS LYACTVGQKP STAIYYLDDA 840 NDVLNMLEAL ADASEEDGSG PPEETSGLST PEQE* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03063 | PLN03063 | 4.0e-163 | 73 | 854 | 817 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
| PLN02205 | PLN02205 | 0 | 1 | 856 | 863 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
| pfam00982 | Glyco_transf_20 | 0 | 73 | 557 | 489 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
| PRK14501 | PRK14501 | 0 | 73 | 853 | 789 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
| cd03788 | GT1_TPS | 0 | 73 | 556 | 484 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005992 | trehalose biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ13427.1 | 0 | 1 | 872 | 1 | 878 | hypothetical protein OsJ_03344 [Oryza sativa Japonica Group] |
| GenBank | EEC71425.1 | 0 | 1 | 872 | 1 | 823 | hypothetical protein OsI_03616 [Oryza sativa Indica Group] |
| RefSeq | NP_001044141.1 | 0 | 1 | 872 | 1 | 878 | Os01g0730300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002456290.1 | 0 | 1 | 873 | 1 | 890 | hypothetical protein SORBIDRAFT_03g033590 [Sorghum bicolor] |
| RefSeq | XP_002458490.1 | 0 | 1 | 865 | 1 | 880 | hypothetical protein SORBIDRAFT_03g034640 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gz5_D | 0 | 155 | 557 | 72 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_C | 0 | 155 | 557 | 72 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_B | 0 | 155 | 557 | 72 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 1gz5_A | 0 | 155 | 557 | 72 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| PDB | 2wtx_D | 0 | 155 | 557 | 73 | 453 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO777775 | 788 | 83 | 864 | 0 |
| HO779327 | 513 | 114 | 623 | 0 |
| HO779327 | 236 | 620 | 855 | 0 |
| HO795511 | 487 | 387 | 873 | 0 |
| HO777775 | 106 | 1 | 105 | 0.005 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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