y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00020850m |
Family | CE10 |
Protein Properties | Length: 316 Molecular Weight: 33062.6 Isoelectric Point: 5.3473 |
Chromosome | Chromosome/Scaffold: 0144453 Start: 1435 End: 2382 |
Description | carboxyesterase 13 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 60 | 312 | 0 |
SFARLYLPPAASEGSTRLPVVVYFHGGGFVIGSAASAAYHRCLNDLAAACPAVAVSVDYRLAPEHPLPAAYEDSLAALEWVLAAADPWLAAHGDRARVFL AGDSAGGNICHHLAMHPGVRAAGLGGVVLIHPWFWGREPVGGEPRGPAKMQKGLWEFVCPGAVGGEDDPRMNPTAPGAPGLEGLTCGKVMVCVAEGDVLR WRGKLYAEAAARARGADPRVELFESEGVGHVFYLLEPATEKARELLDRIAAFV |
Full Sequence |
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Protein Sequence Length: 316 Download |
MSGTEAAAGD DDEVVHDFAP LLLVYRSGRL ERPIAMPPVP PGVDAATGVA SRDVALSPHS 60 FARLYLPPAA SEGSTRLPVV VYFHGGGFVI GSAASAAYHR CLNDLAAACP AVAVSVDYRL 120 APEHPLPAAY EDSLAALEWV LAAADPWLAA HGDRARVFLA GDSAGGNICH HLAMHPGVRA 180 AGLGGVVLIH PWFWGREPVG GEPRGPAKMQ KGLWEFVCPG AVGGEDDPRM NPTAPGAPGL 240 EGLTCGKVMV CVAEGDVLRW RGKLYAEAAA RARGADPRVE LFESEGVGHV FYLLEPATEK 300 ARELLDRIAA FVSTE* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK10162 | PRK10162 | 3.0e-10 | 44 | 168 | 129 | + acetyl esterase; Provisional | ||
cd00312 | Esterase_lipase | 2.0e-11 | 64 | 176 | 125 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
pfam00135 | COesterase | 3.0e-13 | 64 | 176 | 127 | + Carboxylesterase family. | ||
COG0657 | Aes | 1.0e-24 | 1 | 315 | 328 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 3.0e-45 | 80 | 293 | 221 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG41233.1 | 0 | 1 | 315 | 1 | 322 | gibberellin receptor GID1L2 [Zea mays] |
EMBL | CAH67096.1 | 0 | 8 | 315 | 5 | 317 | H0818E04.13 [Oryza sativa (indica cultivar-group)] |
GenBank | EAY94325.1 | 0 | 8 | 315 | 5 | 317 | hypothetical protein OsI_16093 [Oryza sativa Indica Group] |
RefSeq | NP_001052933.1 | 0 | 8 | 315 | 5 | 317 | Os04g0449800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001142317.1 | 0 | 1 | 315 | 1 | 322 | hypothetical protein LOC100274486 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2o7v_A | 1.99965e-42 | 30 | 312 | 32 | 327 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 2o7r_A | 1.99965e-42 | 30 | 312 | 32 | 327 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 2zsi_A | 4e-37 | 77 | 315 | 113 | 351 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 2zsh_A | 4e-37 | 77 | 315 | 113 | 351 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 4e-33 | 77 | 313 | 112 | 348 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL819323 | 258 | 31 | 288 | 0 |
EE028284 | 269 | 1 | 262 | 0 |
EE183621 | 261 | 1 | 254 | 0 |
EE286921 | 252 | 1 | 245 | 0 |
EE154967 | 248 | 1 | 241 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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