Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00021235m |
Family | GH3 |
Protein Properties | Length: 623 Molecular Weight: 67310.2 Isoelectric Point: 7.7977 |
Chromosome | Chromosome/Scaffold: 014270 Start: 2872 End: 7940 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 103 | 337 | 0 |
LSTSLGIPFIYGIDAVHGHNNAYKATIFPHNVGLGATRDPDLVKRIGEATALEVRATGIQYVFAPCIAVCRDPRWGRCYESYSEDPKIVQSMTSLISGLQ GEVPANDVGRPYVAGSKNVAACAKHYVGDGGTYLGINENNTIIDTHGLLSIHMPPYYNSIIRGVSTVMVSYSSWNGKKMHANHFLVTDFLKNKLKFRGFV ISDWEGIDRITDPPHANYSYSIEAGVGAGIDMIMV |
Full Sequence |
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Protein Sequence Length: 623 Download |
MATFHKITLV LIFCLVTLGR SEYLKYKDPK QPVAVRVKDL LSRMTLAEKI GQMTQIELKN 60 ATADVLAKFF IGSVLSGGGT VPAPQASAQA WASTVTELQK GALSTSLGIP FIYGIDAVHG 120 HNNAYKATIF PHNVGLGATR DPDLVKRIGE ATALEVRATG IQYVFAPCIA VCRDPRWGRC 180 YESYSEDPKI VQSMTSLISG LQGEVPANDV GRPYVAGSKN VAACAKHYVG DGGTYLGINE 240 NNTIIDTHGL LSIHMPPYYN SIIRGVSTVM VSYSSWNGKK MHANHFLVTD FLKNKLKFRG 300 FVISDWEGID RITDPPHANY SYSIEAGVGA GIDMIMVPYK YPEFIDDLTT QVQNKVIPMS 360 RIDDAVYRIL RVKFSMGLFE SPYPDPSLAG ELGKQEHRDL AREAVRKSLV LLKNGKSSYT 420 PLLPLPKKAG KILVAGSHAD NLGNQCGGWT ISWQGQPGNN ITAGTTILSG IKAAVDPSTQ 480 VVYSESPDST VLADKYDYAV VVVGEPPYAE TQGDNLNLTI PAPGPSVIQS VCKATKCVVV 540 LISGRPLVVE PYLGDMDAFV AAWLPGSEGQ GVADVLFGDY GFTGKLSRTW FKSVDQLPMN 600 VGDAHYDPLF PFGFGLTTKA AK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 1.0e-42 | 32 | 608 | 615 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 9.0e-55 | 409 | 617 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 1.0e-86 | 44 | 477 | 445 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 6.0e-87 | 37 | 617 | 664 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 2.0e-87 | 45 | 372 | 332 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC49170.1 | 0 | 1 | 622 | 1 | 624 | beta-D-glucan exohydrolase, isoenzyme ExoII [Hordeum vulgare subsp. vulgare] |
GenBank | AAF79936.1 | 0 | 1 | 622 | 1 | 622 | exoglucanase precursor [Zea mays] |
GenBank | AAM13694.1 | 0 | 1 | 622 | 1 | 624 | beta-D-glucan exohydrolase [Triticum aestivum] |
RefSeq | NP_001051275.1 | 0 | 1 | 620 | 1 | 622 | Os03g0749300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130296.1 | 0 | 1 | 622 | 1 | 622 | exoglucanase1 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 22 | 622 | 1 | 603 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
PDB | 1iex_A | 0 | 22 | 622 | 1 | 603 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
PDB | 1iew_A | 0 | 22 | 622 | 1 | 603 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
PDB | 1iev_A | 0 | 22 | 622 | 1 | 603 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
PDB | 1ieq_A | 0 | 22 | 622 | 1 | 603 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |