Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00021245m |
Family | GT90 |
Protein Properties | Length: 369 Molecular Weight: 42631.5 Isoelectric Point: 9.6592 |
Chromosome | Chromosome/Scaffold: 0147376 Start: 2 End: 1638 |
Description | Arabidopsis thaliana protein of unknown function (DUF821) |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT90 | 77 | 169 | 3.8e-27 |
RVPDLDLMFDCEDRPVVGSSDQPPPPLFRYCGSEATLDIPFPDWSFWGWPELNIKPWEALRREIEEGNAMASWTDRAPYAYWKGNPNPRHGAW | |||
GT90 | 180 | 302 | 7.70714e-44 |
FRESDLSKQCTHRYKIYIEGRGWSVSEKYILACDSVALMVRPRFHDFFSRGLAPLRHYWPVRDRAAAMCRSIKFAVDWGNAHLDKAREIGRNASRFVRED RARGRVYDYMLHLLSEYARLLRY |
Full Sequence |
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Protein Sequence Length: 369 Download |
ARECPAYFRW IHEDLRPWRD TGVTLDAVER ARRDAPKFRV TVVAGHLYVA RYGRCFQTRD 60 VFTQWGILQL LRRYPGRVPD LDLMFDCEDR PVVGSSDQPP PPLFRYCGSE ATLDIPFPDW 120 SFWGWPELNI KPWEALRREI EEGNAMASWT DRAPYAYWKG NPNPRHGAWT GGGGELRRGF 180 RESDLSKQCT HRYKIYIEGR GWSVSEKYIL ACDSVALMVR PRFHDFFSRG LAPLRHYWPV 240 RDRAAAMCRS IKFAVDWGNA HLDKAREIGR NASRFVREDR ARGRVYDYML HLLSEYARLL 300 RYRPAVPRGA AEVTIESMAR GRRGRERQFM METDVAADGG AGGEGPCRLP PPFSAQELEA 360 LRGRGRMW* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05686 | Glyco_transf_90 | 1.0e-27 | 258 | 364 | 107 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
pfam05686 | Glyco_transf_90 | 9.0e-87 | 1 | 163 | 168 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
smart00672 | CAP10 | 6.0e-87 | 77 | 302 | 257 | + Putative lipopolysaccharide-modifying enzyme. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI34690.1 | 0 | 4 | 361 | 95 | 471 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001053412.1 | 0 | 4 | 364 | 110 | 494 | Os04g0534000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001142048.1 | 0 | 3 | 362 | 110 | 493 | hypothetical protein LOC100274204 [Zea mays] |
RefSeq | NP_197774.1 | 0 | 4 | 353 | 139 | 507 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002446852.1 | 0 | 4 | 362 | 114 | 490 | hypothetical protein SORBIDRAFT_06g023670 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FE658707 | 178 | 186 | 363 | 0 |
EX132718 | 292 | 66 | 332 | 0 |
FE628124 | 181 | 182 | 362 | 0 |
FL819421 | 196 | 126 | 300 | 0 |
FL819421 | 71 | 54 | 124 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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