Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00021282m |
Family | GT75 |
Protein Properties | Length: 116 Molecular Weight: 13159.2 Isoelectric Point: 5.1029 |
Chromosome | Chromosome/Scaffold: 014193 Start: 23 End: 488 |
Description | reversibly glycosylated polypeptide 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT75 | 18 | 115 | 0 |
LKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFV |
Full Sequence |
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Protein Sequence Length: 116 Download |
MAGTVTVPGA NVPSTPLLKD ELDIVIPTIR NLDFLEMWRP FFQPYHLIIV QDGDPTKTIK 60 VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV SKKKYIYTID DDCFV* 120 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03214 | RGP | 4.0e-50 | 14 | 115 | 104 | + Reversibly glycosylated polypeptide. | ||
PLN03180 | PLN03180 | 1.0e-74 | 10 | 115 | 106 | + reversibly glycosylated polypeptide; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0007047 | : GO:0044234 |
GO:0008466 | glycogenin glucosyltransferase activity |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0030054 | cell junction |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF84514.1 | 0 | 1 | 115 | 1 | 115 | unknown [Zea mays] |
GenBank | EEC75700.1 | 0 | 1 | 115 | 1 | 115 | hypothetical protein OsI_12519 [Oryza sativa Indica Group] |
RefSeq | NP_001050617.1 | 0 | 1 | 115 | 1 | 115 | Os03g0599800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001142134.1 | 0 | 1 | 115 | 1 | 115 | hypothetical protein LOC100274298 [Zea mays] |
RefSeq | XP_002464260.1 | 0 | 1 | 115 | 1 | 115 | hypothetical protein SORBIDRAFT_01g015090 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FE622796 | 115 | 1 | 115 | 0 |
FL876452 | 115 | 1 | 115 | 0 |
FE636815 | 115 | 1 | 115 | 0 |
DN141585 | 115 | 1 | 115 | 0 |
EB668807 | 115 | 1 | 115 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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