Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00021368m |
Family | AA1 |
Protein Properties | Length: 574 Molecular Weight: 61857.2 Isoelectric Point: 6.9126 |
Chromosome | Chromosome/Scaffold: 014388 Start: 7134 End: 10150 |
Description | laccase 12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 30 | 559 | 0 |
EQYHEFVVQEAAVTRLCRKHSIMTVNGQFPGPALEVSEGDSLIVRVINRGGYNVTVHWHGVRQMRTGWSDGPEYVTQCPIRPGQSFTYRFTVAGQEGTLW WHAHSSWLRATVHGALIIRPRSGVPYPFNAGKPPAREIPILLGEWWDMNPMDVVRTATRTGAAPNISDALTVNGQPGDLYRCSSKDTTTFPVRSGETNLL RFINAALNTELFVSLAGHTMTVVGADASYTKPHATSVLMIAPGQTTDVLVTFDQPPGRYYLAARAYASAQGVPFDNTTSTAIFDYGGGSGSGSPAMPTLP AYNDTGTATAFTTSLRGLRKAELPSRMDENLFFTVGVGLINCSAAGQQSCGGPNNTRFAASINNVSFVLPSTLSILQAARYQGGGGGVFSADFPGTPPVQ FDYTAQNVSRALWQPAPGTKVYRLRYGAAVQVVLQGTSILAGENHPIHLHGYDFYILGEGFGNFNAARDTGRLNLEDPPMRNTVGVPVNGWAVIRFVADN PGVWLMHCHLDVHITWGLAMAFLVEDGVGE |
Full Sequence |
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Protein Sequence Length: 574 Download |
MSTSSVLLMT LQVAALLLCW LLQQTVVAKE QYHEFVVQEA AVTRLCRKHS IMTVNGQFPG 60 PALEVSEGDS LIVRVINRGG YNVTVHWHGV RQMRTGWSDG PEYVTQCPIR PGQSFTYRFT 120 VAGQEGTLWW HAHSSWLRAT VHGALIIRPR SGVPYPFNAG KPPAREIPIL LGEWWDMNPM 180 DVVRTATRTG AAPNISDALT VNGQPGDLYR CSSKDTTTFP VRSGETNLLR FINAALNTEL 240 FVSLAGHTMT VVGADASYTK PHATSVLMIA PGQTTDVLVT FDQPPGRYYL AARAYASAQG 300 VPFDNTTSTA IFDYGGGSGS GSPAMPTLPA YNDTGTATAF TTSLRGLRKA ELPSRMDENL 360 FFTVGVGLIN CSAAGQQSCG GPNNTRFAAS INNVSFVLPS TLSILQAARY QGGGGGVFSA 420 DFPGTPPVQF DYTAQNVSRA LWQPAPGTKV YRLRYGAAVQ VVLQGTSILA GENHPIHLHG 480 YDFYILGEGF GNFNAARDTG RLNLEDPPMR NTVGVPVNGW AVIRFVADNP GVWLMHCHLD 540 VHITWGLAMA FLVEDGVGEL QSLEAPPPDL PLC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 5.0e-53 | 36 | 152 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 3.0e-67 | 46 | 551 | 546 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 6.0e-74 | 46 | 562 | 560 | + oxidoreductase | ||
TIGR03388 | ascorbase | 2.0e-88 | 46 | 557 | 550 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 28 | 573 | 550 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF27393.2 | 0 | 52 | 573 | 1 | 522 | Os11g0108700 [Oryza sativa Japonica Group] |
GenBank | EEE52618.1 | 0 | 29 | 573 | 23 | 524 | hypothetical protein OsJ_34955 [Oryza sativa Japonica Group] |
RefSeq | NP_001065548.1 | 0 | 29 | 573 | 23 | 567 | Os11g0108700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001065948.1 | 0 | 29 | 573 | 23 | 567 | Os12g0108000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002448873.1 | 0 | 27 | 573 | 37 | 587 | hypothetical protein SORBIDRAFT_05g000680 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 46 | 551 | 19 | 521 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
PDB | 1asq_A | 0 | 46 | 551 | 19 | 521 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
PDB | 1asp_B | 0 | 46 | 551 | 19 | 521 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
PDB | 1asp_A | 0 | 46 | 551 | 19 | 521 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
PDB | 1aso_B | 0 | 46 | 551 | 19 | 521 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |