| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00021444m |
| Family | GH31 |
| Protein Properties | Length: 503 Molecular Weight: 56115.5 Isoelectric Point: 9.7356 |
| Chromosome | Chromosome/Scaffold: 0142622 Start: 12 End: 2834 |
| Description | |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH31 | 339 | 502 | 2.3e-26 |
| LDGDSPTQLLTSYTESTGRPPVLPRWITSGAIVGMQGGTDTVRRVWNQLQDYDVPVSAFWLQDWVGQRKTAIGSQLWWNWEVDDAHYQGWRDLVDDLRRS GIRTMTYCNPCLVPMDQKPNTKRHLFEEAKKLGILVKDEAGEPYMMPNTAFDVAMLDFTNPEAH | |||
| Full Sequence |
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| Protein Sequence Length: 503 Download |
| ASLVQGRRQA AAATRAARCW RRVPGVAFLS AANAATEADE CRGSFALRDG RARLVPHRQH 60 VDKIRAFYRC DAEAGAGLLR GAAFQASDAT RFPVLVITGL LSAKPSSPAS CSCCGQRAGR 120 RAAGRPALSA RYWILLEEKT DTQVAFSVKI GDYQWTCARA DPAKSPPATA TATTTPRIHR 180 PSLRLRLSAR VQRATSKKTR LAPSREEASA LLPPEPERAE ARPEEFNRVF LTYASSRDER 240 FYGFGEQFSR VEFKGKRVPV LVQEQGIGRG DQPITFAANL VSYRSGGNWS TTYAPSPFYM 300 TSKMRSLYLE GYDYSIFDLT KPDRVQIQIY GNSVQGRILD GDSPTQLLTS YTESTGRPPV 360 LPRWITSGAI VGMQGGTDTV RRVWNQLQDY DVPVSAFWLQ DWVGQRKTAI GSQLWWNWEV 420 DDAHYQGWRD LVDDLRRSGI RTMTYCNPCL VPMDQKPNTK RHLFEEAKKL GILVKDEAGE 480 PYMMPNTAFD VAMLDFTNPE AHA |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK10658 | PRK10658 | 3.0e-9 | 238 | 501 | 298 | + putative alpha-glucosidase; Provisional | ||
| pfam01055 | Glyco_hydro_31 | 1.0e-17 | 341 | 503 | 168 | + Glycosyl hydrolases family 31. Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Family 31 comprises of enzymes that are, or similar to, alpha- galactosidases. | ||
| COG1501 | COG1501 | 5.0e-28 | 227 | 501 | 287 | + Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] | ||
| cd06594 | GH31_glucosidase_YihQ | 9.0e-58 | 356 | 501 | 146 | + YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride. Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. | ||
| PRK10426 | PRK10426 | 2.0e-96 | 227 | 501 | 276 | + alpha-glucosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD81144.1 | 0 | 7 | 503 | 84 | 593 | alpha-glucosidase -like [Oryza sativa Japonica Group] |
| GenBank | EEE54297.1 | 0 | 16 | 503 | 90 | 594 | hypothetical protein OsJ_01231 [Oryza sativa Japonica Group] |
| RefSeq | XP_002308887.1 | 0 | 20 | 503 | 76 | 558 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002455428.1 | 0 | 6 | 503 | 84 | 591 | hypothetical protein SORBIDRAFT_03g010640 [Sorghum bicolor] |
| RefSeq | XP_002522166.1 | 0 | 14 | 501 | 72 | 555 | alpha-xylosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4kmq_A | 0.0000000002 | 226 | 501 | 256 | 535 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1we5_F | 0.0000001 | 186 | 501 | 107 | 394 | A Chain A, Crystal Structure Of Alpha-Xylosidase From Escherichia Coli |
| PDB | 1we5_E | 0.0000001 | 186 | 501 | 107 | 394 | A Chain A, Crystal Structure Of Alpha-Xylosidase From Escherichia Coli |
| PDB | 1we5_D | 0.0000001 | 186 | 501 | 107 | 394 | A Chain A, Crystal Structure Of Alpha-Xylosidase From Escherichia Coli |
| PDB | 1we5_C | 0.0000001 | 186 | 501 | 107 | 394 | A Chain A, Crystal Structure Of Alpha-Xylosidase From Escherichia Coli |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CO467346 | 224 | 280 | 503 | 0 |
| DR734448 | 223 | 273 | 495 | 0 |
| EC886654 | 234 | 186 | 414 | 0 |
| FL860817 | 179 | 325 | 503 | 0 |
| FL906134 | 179 | 325 | 503 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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