| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00021810m |
| Family | GH5 |
| Protein Properties | Length: 389 Molecular Weight: 43168 Isoelectric Point: 4.9867 |
| Chromosome | Chromosome/Scaffold: 0144396 Start: 914 End: 2640 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 51 | 362 | 1.4e-28 |
| SGRPFVVHGFNTYWLMYFAADPATRPTVTAALAEAADAGLNVCRTWAFNDGGSRALQLKPFSYDEEVFQALDFVISEARKHKIRLILSLCNNWKDYGGKA QYVRWGKEAGLDLTSDDDFFTDPTIKSFVMTDDPTILAWELINEPRCHSDPSGDALQMASYVKSIDLVHLLEIGVEGFYGPSTPELLHVNPDAYSGTVGT YFIRNHRALGIDLASIHIYSDTWLPHSVEDSHLQFVNTWMQQHIGDAANLLGMPILIGEFGVSLKDGRFGNEFRESFMETVYTVFSSSWKSGVIGGGCLV WQLFPENAEHMD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 389 Download |
| MCRPHVAPPL SATPRVSLLR CILLATCISV MPPDADEWAV VERRGPHLLE SGRPFVVHGF 60 NTYWLMYFAA DPATRPTVTA ALAEAADAGL NVCRTWAFND GGSRALQLKP FSYDEEVFQA 120 LDFVISEARK HKIRLILSLC NNWKDYGGKA QYVRWGKEAG LDLTSDDDFF TDPTIKSFVM 180 TDDPTILAWE LINEPRCHSD PSGDALQMAS YVKSIDLVHL LEIGVEGFYG PSTPELLHVN 240 PDAYSGTVGT YFIRNHRALG IDLASIHIYS DTWLPHSVED SHLQFVNTWM QQHIGDAANL 300 LGMPILIGEF GVSLKDGRFG NEFRESFMET VYTVFSSSWK SGVIGGGCLV WQLFPENAEH 360 MDDGYAVIFT KSPSTLNVLS NHSRALEC* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam00150 | Cellulase | 0.0002 | 48 | 322 | 290 | + Cellulase (glycosyl hydrolase family 5). |
| COG3934 | COG3934 | 8.0e-17 | 89 | 313 | 235 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ19452.1 | 0 | 40 | 388 | 1 | 369 | hypothetical protein OsJ_35013 [Oryza sativa Japonica Group] |
| GenBank | EEC67554.1 | 0 | 38 | 388 | 9 | 379 | hypothetical protein OsI_34887 [Oryza sativa Indica Group] |
| GenBank | EEE52650.1 | 0 | 38 | 388 | 9 | 382 | hypothetical protein OsJ_35012 [Oryza sativa Japonica Group] |
| Swiss-Prot | Q2RBB1 | 0 | 38 | 388 | 9 | 379 | MAN7_ORYSJ RecName: Full=Mannan endo-1,4-beta-mannosidase 7; AltName: Full=Beta-mannanase 7; AltName: Full=Endo-beta-1,4-mannanase 7; AltName: Full=OsMAN7 |
| RefSeq | XP_002450155.1 | 0 | 31 | 387 | 1 | 383 | hypothetical protein SORBIDRAFT_05g001260 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 45 | 379 | 11 | 362 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 1e-35 | 44 | 312 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 1e-35 | 44 | 312 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 1e-35 | 44 | 312 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 1e-35 | 44 | 312 | 17 | 310 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
