y
Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00022553m |
Family | GT37 |
Protein Properties | Length: 588 Molecular Weight: 64407.5 Isoelectric Point: 9.0043 |
Chromosome | Chromosome/Scaffold: 002271 Start: 11721 End: 13631 |
Description | fucosyltransferase 1 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT37 | 99 | 557 | 0 |
ERSYDKLLGGLLADGFDERSCRSRYQSVMYRRRPSRRPAAYLVSKLRQQEALQRRCGPGTAAYGHALEQLRSGKSGGGGAAGAQQDCKYLVSISYRGLGN RILATASAFLYAVLTGRALLVDPSNEMGELFCEPFPGTTWLLPPAGFPLASYTNFSVATAESYGNMLRSKAIRTDAAAAAAGGDVPAFSYVHLDHDATDQ DKLFFCDEDQRVLRNIPWLVMRTDNYIVPGLFLVAGFREELGRMFPEPDTAFHHAARYLFHPSNHVWGLVARYHDAYLAAAQRRVGIQVRVFGSQPDSPA LLEQITRCTQKERLLPELLAAAEDADPAAQPGPSRKTKAVLVTSLKSWYYEKLKGMYWERAAAGGEAVSVQQPSHEEFQRFGARSHDAKAWAEMYLLSLT DALVTTAWSTFGYVAQGLAGVRPWVLYRPDNETHVPDPPCGRDVSMEPCFHAPPFYDCR |
Full Sequence |
---|
Protein Sequence Length: 588 Download |
MRQREAKLGV DGAAAPWKEP PLPQQRSAAG RWLDAEAAAA LGLAPRTKRA PFCSVINVVL 60 AAFVLTVPTM VILLGARATA PGVRIISSAD DVVRRGGGER SYDKLLGGLL ADGFDERSCR 120 SRYQSVMYRR RPSRRPAAYL VSKLRQQEAL QRRCGPGTAA YGHALEQLRS GKSGGGGAAG 180 AQQDCKYLVS ISYRGLGNRI LATASAFLYA VLTGRALLVD PSNEMGELFC EPFPGTTWLL 240 PPAGFPLASY TNFSVATAES YGNMLRSKAI RTDAAAAAAG GDVPAFSYVH LDHDATDQDK 300 LFFCDEDQRV LRNIPWLVMR TDNYIVPGLF LVAGFREELG RMFPEPDTAF HHAARYLFHP 360 SNHVWGLVAR YHDAYLAAAQ RRVGIQVRVF GSQPDSPALL EQITRCTQKE RLLPELLAAA 420 EDADPAAQPG PSRKTKAVLV TSLKSWYYEK LKGMYWERAA AGGEAVSVQQ PSHEEFQRFG 480 ARSHDAKAWA EMYLLSLTDA LVTTAWSTFG YVAQGLAGVR PWVLYRPDNE THVPDPPCGR 540 DVSMEPCFHA PPFYDCRLKR GADTGKIVPQ VQHCIDMSWG LKIVHRG* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd11548 | NodZ_like | 0.0001 | 195 | 220 | 26 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
pfam03254 | XG_FTase | 0 | 96 | 557 | 463 | + Xyloglucan fucosyltransferase. Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity |
GO:0016020 | membrane |
GO:0042546 | cell wall biogenesis |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD35723.1 | 0 | 1 | 586 | 1 | 589 | putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa Japonica Group] |
GenBank | EEC80216.1 | 0 | 24 | 587 | 19 | 593 | hypothetical protein OsI_22131 [Oryza sativa Indica Group] |
RefSeq | NP_001048214.1 | 0 | 88 | 584 | 89 | 601 | Os02g0764200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001057123.1 | 0 | 24 | 587 | 19 | 591 | Os06g0212300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002438039.1 | 0 | 98 | 586 | 70 | 543 | hypothetical protein SORBIDRAFT_10g007130 [Sorghum bicolor] |