y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00022554m |
Family | GT37 |
Protein Properties | Length: 493 Molecular Weight: 54657.9 Isoelectric Point: 7.7684 |
Chromosome | Chromosome/Scaffold: 002271 Start: 7087 End: 8944 |
Description | fucosyltransferase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT37 | 4 | 461 | 0 |
RRAAHYDRLYGGLLVDGFNEESCHSRYQSAAYRRNPGRRPSPYLVSKLRRHEALQRRCGPGTAAYSAALEQLRSGRSAASPAECAYVISISYRGIGNRIL AAASAFLYAVLTGRALLVDPGNEMDDLFCEPFPNTTWLLPPAGFPLPDYANFSVGTAASYGNMVRNKVIIRGDGDGDDAPTTAAQPLPAFAYVHLNYDAT VEDNSFFCGGDQRLLRRIQWLVMRTDSYIVPGLFLVPEFREELAALFPERDAVFHHLGRYLFHPNNHVWGLVTRYYDTYLASARQRVGIQVRVFGGMPDS PELLEQITSCTRKEGLLPQVLAAGEPISPASRAKSKAVLVTSLKSWYYEELKSMYWEHATATGEVVSVHQPSHEEYQRSGAASHDRKAWAEIYLLSLTDV LVTSGRSTFGYVAQGLAGVRPWVLYKPANSSAAVPDPPCGRDVSMEPCFHKPPGHDCR |
Full Sequence |
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Protein Sequence Length: 493 Download |
MVHRRAAHYD RLYGGLLVDG FNEESCHSRY QSAAYRRNPG RRPSPYLVSK LRRHEALQRR 60 CGPGTAAYSA ALEQLRSGRS AASPAECAYV ISISYRGIGN RILAAASAFL YAVLTGRALL 120 VDPGNEMDDL FCEPFPNTTW LLPPAGFPLP DYANFSVGTA ASYGNMVRNK VIIRGDGDGD 180 DAPTTAAQPL PAFAYVHLNY DATVEDNSFF CGGDQRLLRR IQWLVMRTDS YIVPGLFLVP 240 EFREELAALF PERDAVFHHL GRYLFHPNNH VWGLVTRYYD TYLASARQRV GIQVRVFGGM 300 PDSPELLEQI TSCTRKEGLL PQVLAAGEPI SPASRAKSKA VLVTSLKSWY YEELKSMYWE 360 HATATGEVVS VHQPSHEEYQ RSGAASHDRK AWAEIYLLSL TDVLVTSGRS TFGYVAQGLA 420 GVRPWVLYKP ANSSAAVPDP PCGRDVSMEP CFHKPPGHDC RLKQWADPSK DVPYIQHCDD 480 AIWGLKLVGQ NT* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd11548 | NodZ_like | 3.0e-6 | 97 | 419 | 337 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
pfam03254 | XG_FTase | 0 | 6 | 461 | 458 | + Xyloglucan fucosyltransferase. Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. |
Gene Ontology | |
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GO Term | Description |
GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity |
GO:0016020 | membrane |
GO:0042546 | cell wall biogenesis |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD35723.1 | 0 | 1 | 488 | 97 | 587 | putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa Japonica Group] |
GenBank | EEC80216.1 | 0 | 25 | 488 | 122 | 590 | hypothetical protein OsI_22131 [Oryza sativa Indica Group] |
RefSeq | NP_001057123.1 | 0 | 25 | 488 | 120 | 588 | Os06g0212300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001132645.1 | 0 | 35 | 491 | 2 | 465 | hypothetical protein LOC100194120 [Zea mays] |
RefSeq | XP_002438038.1 | 0 | 1 | 491 | 61 | 552 | hypothetical protein SORBIDRAFT_10g007120 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT940871 | 248 | 253 | 493 | 0 |
DT940872 | 266 | 6 | 269 | 0 |
FL739391 | 183 | 1 | 183 | 0 |
GT043638 | 317 | 97 | 412 | 0 |
CV288405 | 321 | 144 | 461 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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