CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00022766m
FamilyGH16
Protein PropertiesLength: 279 Molecular Weight: 31376.1 Isoelectric Point: 6.0262
ChromosomeChromosome/Scaffold: 002921 Start: 2069 End: 3164
DescriptionXyloglucan endotransglucosylase/hydrolase family protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH16502058.8e-26
  LNLDRSSGPAGFNSKEQFLYGEFSIEMKLIPGNSAGTVSCFYLSSGTDDWRDEIDMEFMGNSSGQPVVLNTNVWANGDGKKEHQFDLWFDPSADYHTYTI
  IWNPENILFKVDNVFIRSFKRYADLPYPSSKPMTLHATLWDGSYWATEKGKVPIDW
Full Sequence
Protein Sequence     Length: 279     Download
MAGRRSLALL AVSLALLQVA SAARSWLTEF TTDGTVRTGY DASGQKVMML NLDRSSGPAG    60
FNSKEQFLYG EFSIEMKLIP GNSAGTVSCF YLSSGTDDWR DEIDMEFMGN SSGQPVVLNT    120
NVWANGDGKK EHQFDLWFDP SADYHTYTII WNPENILFKV DNVFIRSFKR YADLPYPSSK    180
PMTLHATLWD GSYWATEKGK VPIDWSNAPF VVSYRSFYAN ACVSGGACHA GRDGWMHRQL    240
DAAEWGTVRW AERNYMRYNY CQDGWRFSQG LPAECSRN* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam06955XET_C9.0e-1622827551+
cd02175GH16_lichenase1.0e-1648192154+
pfam00722Glyco_hydro_165.0e-6044206164+
PLN03161PLN031611.0e-6748277242+
cd02176GH16_XET2.0e-11543275243+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005618cell wall
GO:0005975carbohydrate metabolic process
GO:0006073cellular glucan metabolic process
GO:0016762xyloglucan:xyloglucosyl transferase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACG38167.101827819281xyloglucan endotransglycosylase/hydrolase protein 8 precursor [Zea mays]
GenBankACN31920.102527826281unknown [Zea mays]
RefSeqNP_001105166.102527826280xyloglucan endo-transglycosylase/hydrolase [Zea mays]
RefSeqXP_002446422.102527827280hypothetical protein SORBIDRAFT_06g015880 [Sorghum bicolor]
RefSeqXP_002446425.102227820277hypothetical protein SORBIDRAFT_06g015930 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1un1_B04327834275A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40
PDB1un1_A04327834275A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40
PDB1umz_B04327834275A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB1umz_A04327834275A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB2uwb_B04527537267A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
Signal Peptide
Cleavage Site
22
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
FL945578247262720
FL919502217262420
DV508848256262790
EE287470256262790
FL949394217262420
Orthologous Group
SpeciesID
Brachypodium distachyonBradi1g09690.1Bradi1g09700.1Bradi3g18590.1Bradi3g18600.1Bradi5g20718.1
Oryza sativaLOC_Os08g13920.1
Panicum virgatumPavirv00014997mPavirv00060809mPavirv00011489mPavirv00032512mPavirv00011651m
Pavirv00065073mPavirv00039266mPavirv00018963mPavirv00059833m
Setaria italicaSi014242mSi014194mSi014232mSi014215mSi014233m
Sorghum bicolorSb06g015930.1Sb06g015880.1Sb06g015940.1Sb07g009410.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny