y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00022808m |
Family | CE10 |
Protein Properties | Length: 357 Molecular Weight: 38235.8 Isoelectric Point: 6.2695 |
Chromosome | Chromosome/Scaffold: 003403 Start: 13246 End: 14316 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 68 | 329 | 4.2039e-45 |
DLPGEPGFRVYLPEAGGGRLPVIVHLHGGGFCVSHPSWLMYHHFYSRLSCTVPAVVVSVELPLAPEHRLPAHVETGVAALRRLRSIALAENGGALDDPAA KLLREAADVSRVFLIGDSSGANLVHFVAARVSQHGAGTWAPLRVAGGIPIHPGFVRATRSRSELEVRSDSVFFTLDMLDMLDKFNAMALPVGATKEHPFT CPMGPQAPPLESVPLPPMLVAVGENDLVRDRNLEYCDALRAAGMDVEVLLSRGMSHAFYLNK |
Full Sequence |
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Protein Sequence Length: 357 Download |
MANAPLAETL PQAGAAGGRK VVNEVSGWLR VLDDGTVDRT WTGPPEALPL MQPVPPYAAP 60 RDGHTLHDLP GEPGFRVYLP EAGGGRLPVI VHLHGGGFCV SHPSWLMYHH FYSRLSCTVP 120 AVVVSVELPL APEHRLPAHV ETGVAALRRL RSIALAENGG ALDDPAAKLL REAADVSRVF 180 LIGDSSGANL VHFVAARVSQ HGAGTWAPLR VAGGIPIHPG FVRATRSRSE LEVRSDSVFF 240 TLDMLDMLDK FNAMALPVGA TKEHPFTCPM GPQAPPLESV PLPPMLVAVG ENDLVRDRNL 300 EYCDALRAAG MDVEVLLSRG MSHAFYLNKF AVDMDPSTGE RTQELIDAIT SFVARN* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00312 | Esterase_lipase | 0.003 | 84 | 215 | 151 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
COG2272 | PnbA | 0.0003 | 21 | 126 | 131 | + Carboxylesterase type B [Lipid metabolism] | ||
COG0657 | Aes | 5.0e-25 | 35 | 356 | 323 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 2.0e-43 | 90 | 327 | 238 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY98033.1 | 0 | 23 | 356 | 31 | 362 | hypothetical protein OsI_19949 [Oryza sativa Indica Group] |
RefSeq | NP_001055531.1 | 0 | 23 | 356 | 31 | 362 | Os05g0410200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001152160.1 | 0 | 18 | 356 | 19 | 359 | hsr203J [Zea mays] |
RefSeq | XP_002439797.1 | 0 | 1 | 354 | 1 | 360 | hypothetical protein SORBIDRAFT_09g020220 [Sorghum bicolor] |
RefSeq | XP_002439798.1 | 0 | 11 | 356 | 13 | 363 | hypothetical protein SORBIDRAFT_09g020230 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ed1_F | 8e-29 | 87 | 327 | 112 | 329 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 3ed1_E | 8e-29 | 87 | 327 | 112 | 329 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 3ed1_D | 8e-29 | 87 | 327 | 112 | 329 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 3ed1_C | 8e-29 | 87 | 327 | 112 | 329 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
PDB | 3ed1_B | 8e-29 | 87 | 327 | 112 | 329 | A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HX140045 | 256 | 102 | 357 | 0 |
CK162633 | 267 | 4 | 264 | 0 |
DV475625 | 268 | 4 | 267 | 0 |
CT842910 | 237 | 23 | 257 | 0 |
DY375826 | 268 | 18 | 282 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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