Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00022900m |
Family | GH9 |
Protein Properties | Length: 491 Molecular Weight: 54214.3 Isoelectric Point: 8.7134 |
Chromosome | Chromosome/Scaffold: 003736 Start: 2559 End: 4269 |
Description | glycosyl hydrolase 9B8 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 43 | 479 | 0 |
DYKRALHSSLLYFEAQRSGHLPYNQRVRWRGHSQGVDLVGGYYDAGDNVKFGRPMAFTVTMLSWSAIEFGAEVAAASEWRHVLEAVKWGTDYLVKAHTEP DVLWAERPEDMTTSRQAYMVDRDNPGSDLAGETAAAMAAASIIFRRSNPHYSHLLLHHAEQLFEFGDKYRGKYDSSVGAAWRYYASVSGYGDEMLWAALW LHRATGRAEYLDYAVAMADEFGSTSWAIAEFSWDVKYAGLQILAAKLLLEGRHRPEHRPTLEQYRSKAEHYLCACLGKNGAAGNVNRTAAGMLYVRQWNN MQYVTNAAFLLAAYSRYLTASRGAAAAAEPAVLRCPDGPVGAGELLALARAQADYVLGANPAGLSYMVGYGRRFPRRVHHRTASIVSRRADGWFVGCVQG YDHCGPDRHDRFGDRRSNYMQTEACTYNTAPMVGVFA |
Full Sequence |
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Protein Sequence Length: 491 Download |
MARGGSIKTL ASLCSVLMLL LLQLQLVAAA GGGGHGARRP SFDYKRALHS SLLYFEAQRS 60 GHLPYNQRVR WRGHSQGVDL VGGYYDAGDN VKFGRPMAFT VTMLSWSAIE FGAEVAAASE 120 WRHVLEAVKW GTDYLVKAHT EPDVLWAERP EDMTTSRQAY MVDRDNPGSD LAGETAAAMA 180 AASIIFRRSN PHYSHLLLHH AEQLFEFGDK YRGKYDSSVG AAWRYYASVS GYGDEMLWAA 240 LWLHRATGRA EYLDYAVAMA DEFGSTSWAI AEFSWDVKYA GLQILAAKLL LEGRHRPEHR 300 PTLEQYRSKA EHYLCACLGK NGAAGNVNRT AAGMLYVRQW NNMQYVTNAA FLLAAYSRYL 360 TASRGAAAAA EPAVLRCPDG PVGAGELLAL ARAQADYVLG ANPAGLSYMV GYGRRFPRRV 420 HHRTASIVSR RADGWFVGCV QGYDHCGPDR HDRFGDRRSN YMQTEACTYN TAPMVGVFAL 480 LHSEGVQERK * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00759 | Glyco_hydro_9 | 6.0e-158 | 43 | 479 | 471 | + Glycosyl hydrolase family 9. | ||
PLN00119 | PLN00119 | 1.0e-164 | 41 | 481 | 477 | + endoglucanase | ||
PLN02420 | PLN02420 | 0 | 41 | 485 | 482 | + endoglucanase | ||
PLN02171 | PLN02171 | 0 | 43 | 481 | 475 | + endoglucanase | ||
PLN02340 | PLN02340 | 0 | 42 | 483 | 478 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ07048.1 | 0 | 42 | 489 | 35 | 514 | hypothetical protein OsI_29295 [Oryza sativa Indica Group] |
GenBank | EEE68717.1 | 0 | 12 | 489 | 6 | 496 | hypothetical protein OsJ_27375 [Oryza sativa Japonica Group] |
Swiss-Prot | Q84Q51 | 0 | 12 | 489 | 6 | 514 | GUN21_ORYSJ RecName: Full=Endoglucanase 21; AltName: Full=Endo-1,4-beta glucanase 21; AltName: Full=OsGLU9; Flags: Precursor |
RefSeq | XP_002445507.1 | 0 | 10 | 484 | 2 | 499 | hypothetical protein SORBIDRAFT_07g020700 [Sorghum bicolor] |
RefSeq | XP_002454315.1 | 0 | 44 | 490 | 67 | 546 | hypothetical protein SORBIDRAFT_04g028520 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 41 | 481 | 2 | 429 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1ksc_A | 0 | 41 | 481 | 2 | 429 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1ks8_A | 0 | 41 | 481 | 2 | 429 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 41 | 482 | 23 | 460 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 39 | 484 | 1 | 443 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |