| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00022940m |
| Family | GT66 |
| Protein Properties | Length: 770 Molecular Weight: 85239.2 Isoelectric Point: 9.4686 |
| Chromosome | Chromosome/Scaffold: 002299 Start: 1840 End: 9096 |
| Description | staurosporin and temperature sensitive 3-like A |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT66 | 26 | 700 | 0 |
| CAFTLLLIGVIAFSIRLFSVIKYESVIHEFDPYFNYRVTQFLSKNGIYEFWNWFDDRTWYPLGRVIGGTVYPGLTLTAGTMWWLLNSLNIPLSVETVCVF TAPIFSANASWATYLLTKEAKGSGAGLMAAAILAMVPSYISRSVAGSYDNEAVAIFALIFTFYLYVKTLNTGSLFYATLNALSYFYMVCSWGGYTFIINL IPMHVLLCIVTGRYSSRLYIAYAPLVVLGTLLAALVPVVGFNAVMTSEHFASFLVFIILHVVALVYYIKGLLTPRLFKVAMTFVVTVGLAVCFAVAAILI ALVASSPTKGWSGRSLSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDINVLAFLIPAGIISCFLPLSDASSFLVLYLVTSVYFSGVMVRLMLVLAPAAC ILSGIALSEAFGVLTRSMKFQRPISDDGSSTAHDGSFDTPANSEPVSKEKPSKKNRKKNKGSEGSPPVNPRTEEKLLVLPCGPSAVGIMLLIILSGFYVV HCVWAAAEAYSAPSIVLTSRSHDGLHVFDDFREAYGWLRHNTDVDDKVASWWDYGYQTTAMANRTVIVDNNTWNNTHIATVGTAMASPEKAAWEILNSLD VKYVFVVFGGLIGYSSDDINKFLWMVRIGGGVFPHIKEADYLRDGNYRVDAHGTPTMLNSLMYKLCYYRFVETDG | |||
| Full Sequence |
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| Protein Sequence Length: 770 Download |
| MPEPLSSTAA SGGGGRLRNA FGGVLCAFTL LLIGVIAFSI RLFSVIKYES VIHEFDPYFN 60 YRVTQFLSKN GIYEFWNWFD DRTWYPLGRV IGGTVYPGLT LTAGTMWWLL NSLNIPLSVE 120 TVCVFTAPIF SANASWATYL LTKEAKGSGA GLMAAAILAM VPSYISRSVA GSYDNEAVAI 180 FALIFTFYLY VKTLNTGSLF YATLNALSYF YMVCSWGGYT FIINLIPMHV LLCIVTGRYS 240 SRLYIAYAPL VVLGTLLAAL VPVVGFNAVM TSEHFASFLV FIILHVVALV YYIKGLLTPR 300 LFKVAMTFVV TVGLAVCFAV AAILIALVAS SPTKGWSGRS LSLLDPTYAS KYIPIIASVS 360 EHQPPTWPSY FMDINVLAFL IPAGIISCFL PLSDASSFLV LYLVTSVYFS GVMVRLMLVL 420 APAACILSGI ALSEAFGVLT RSMKFQRPIS DDGSSTAHDG SFDTPANSEP VSKEKPSKKN 480 RKKNKGSEGS PPVNPRTEEK LLVLPCGPSA VGIMLLIILS GFYVVHCVWA AAEAYSAPSI 540 VLTSRSHDGL HVFDDFREAY GWLRHNTDVD DKVASWWDYG YQTTAMANRT VIVDNNTWNN 600 THIATVGTAM ASPEKAAWEI LNSLDVKYVF VVFGGLIGYS SDDINKFLWM VRIGGGVFPH 660 IKEADYLRDG NYRVDAHGTP TMLNSLMYKL CYYRFVETDG KGFDRVRRYE IGKKHFKLTH 720 FEEVFTTHHW MVRIYKLKPQ KNRVRGKLKL KSSSKTSSRH KTSGKKRPW* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR04154 | archaeo_STT3 | 4.0e-8 | 30 | 232 | 229 | + oligosaccharyl transferase, archaeosortase A system-associated. Members of this protein family occur, one to three members per genome, in the same species of Euryarchaeota as contain the predicted protein-sorting enzyme archaeosortase (TIGR04125) and its cognate protein-sorting signal PGF-CTERM (TIGR04126). | ||
| pfam02516 | STT3 | 6.0e-34 | 522 | 697 | 185 | + Oligosaccharyl transferase STT3 subunit. This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes, OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone, rather than in an OTase complex, and is required for N-glycosylation of asparagines. | ||
| COG1287 | COG1287 | 2.0e-55 | 25 | 742 | 762 | + Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only] | ||
| pfam02516 | STT3 | 3.0e-70 | 24 | 436 | 430 | + Oligosaccharyl transferase STT3 subunit. This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes, OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone, rather than in an OTase complex, and is required for N-glycosylation of asparagines. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004576 | oligosaccharyl transferase activity |
| GO:0006486 | protein glycosylation |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC79544.1 | 0 | 13 | 769 | 340 | 1118 | hypothetical protein OsI_20658 [Oryza sativa Indica Group] |
| RefSeq | NP_001056068.1 | 0 | 1 | 769 | 1 | 786 | Os05g0519900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001146306.1 | 0 | 1 | 769 | 1 | 717 | hypothetical protein LOC100279881 [Zea mays] |
| RefSeq | XP_002441399.1 | 0 | 16 | 769 | 16 | 781 | hypothetical protein SORBIDRAFT_09g025920 [Sorghum bicolor] |
| RefSeq | XP_002456347.1 | 0 | 66 | 769 | 1 | 704 | hypothetical protein SORBIDRAFT_03g034385 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2lgz_A | 0 | 526 | 766 | 20 | 266 | A Chain A, Solution Structure Of Stt3p |
| PDB | 3vu0_C | 0.0009 | 555 | 655 | 6 | 113 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vu0_B | 0.0009 | 555 | 655 | 6 | 113 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vu0_A | 0.0009 | 555 | 655 | 6 | 113 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
