| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00022973m |
| Family | GT48 |
| Protein Properties | Length: 1732 Molecular Weight: 200449 Isoelectric Point: 9.7521 |
| Chromosome | Chromosome/Scaffold: 003062 Start: 3 End: 6498 |
| Description | glucan synthase-like 5 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT48 | 820 | 1589 | 0 |
| VPKNLEARRRIAFFSNSLFMNIPRATQVEKMMAFSVLTPYYNEEVLYSKDQLYKENEDGISILYYLQKIYPDEWEYFLERMKRDGMSDIKELYSEKERLR SLRHWVSYRGQTLSRTVRGMMYYYEALKMLTFLDSASEHDLKTGSRELATMGSSRIGSSRHDGVAGGSGYYSRAPSSRALSRASSSVSSLFKGSEYGTVL MKYTYVVACQIYGQQKAKNDPCAFEILELMKKYEAMRVAYVDERQNNGGETEYFSVLVKYDQQLQREVEIYRVKLPGELKLGEGKPENQNHALIFTRGDA VQTIDMNQDNYFEEALKMRNLLEEFNRHYGIRKPKILGVREHVFTGSVSSLAWFMSAQETSFVTLGQRVLADPLKVRMHYGHPDVFDRLWFLGRGGISKA SKVINISEDIFAGFNCTLRGGNVTHHEYIQVGKGRDVGLNQVSLFEAKVASGNGEQTLSRDVYRLGHRLDFFRMLSFFYTTVGFYFNTMMVVLTVYAFVW GRFYLALSGLEDYISKNTSSTNNAALGAVLNQQFVIQLGLFTALPMIIENSLEHGFLTAVWDFMKMQLQFASVFYTFSMGTKTHYYGRTILHGGAKYRAT GRGFVVEHKKFAENYRLYARSHFVKAIELGVILTLYASYGSASGNTLVYILLTLSSWFLVLSWILAPFIFNPSGLDWLKNFNDFEDFLNWIWFHGGISVK VDQSWEKWWEDETDHLRMTGLWGSILEIILDLRFFFFQYAIVYRLHIADQSRSILVYLLSWACILLAFVA | |||
| Full Sequence |
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| Protein Sequence Length: 1732 Download |
| ADHPSLRFPE VRAAAAALRA VGGLRPPPFA QWRADHDIMD WLGAFFGFQR DNMRLSSADF 60 SDALDPRIAH QIRKKLLRNY TSWCGFLGRR PNVHVPDGDP RADLLFTGLH LLVWGEAANL 120 RFVPECLCYI YHHMALELHR ILEGYTDVAT GRPANPAVHG ENAFLTRVVT PIYNVIRAEV 180 QASRGGTAPH AAWRNYDDIN EYFWRRDVFD RLGWPMEQSR QFFRTPPDRS RVRKTGFVEV 240 RSFWNIYRSF DRLWVMLVLY LQAAAIVAWE GATWPWDDLL SSRGSKSKDT QVRVLTIFIT 300 WAALRFLQSL LDIGTQFRRA FRDGRMLAVR MVLKAIAAAA WVLAFSVLYK GIWDQRRSNG 360 QWSSAVNSRI MRLLYAAAVF VIPEVLALVL FIVPWVRNAL EKTNWRICYA LTWWFHSRSF 420 VGRGLREGTI DNVKYSIFWV LLLAVKFAFS YFLQIRPLVK PTKEIYKLSG IQYTWHEFFG 480 QSNRFAVFVL WLPVVLIYLM DIQIWYAIFS SLTGAFVGLF AHLGEIRDMK QLRLRFQFFA 540 SAMSFNIMPE EQQVNESFLP SRLRNFWQRL QLRYGFSRSF RKIESNQVEA RRFALVWNEI 600 ISKFREEDIV SDREVELLEL PPELWNVRVI RWPCFLLCNE LSLALGQAKE VKGSDRRLWR 660 KICKNDYRRC AVIEVYDSAK HLLLQILKDG TEEHGIVTQL FNDFDGSMQM GKFTVEYKMT 720 ELHSVHTRLV TLLSLLLKPT KDVTKIVNAL QTLYDVVIRD FQAEKRSMEQ LRNEGLAQSR 780 PTSLPFVDAV VLPGEENFTF YKQVKRMHTI LTSRDSMINV PKNLEARRRI AFFSNSLFMN 840 IPRATQVEKM MAFSVLTPYY NEEVLYSKDQ LYKENEDGIS ILYYLQKIYP DEWEYFLERM 900 KRDGMSDIKE LYSEKERLRS LRHWVSYRGQ TLSRTVRGMM YYYEALKMLT FLDSASEHDL 960 KTGSRELATM GSSRIGSSRH DGVAGGSGYY SRAPSSRALS RASSSVSSLF KGSEYGTVLM 1020 KYTYVVACQI YGQQKAKNDP CAFEILELMK KYEAMRVAYV DERQNNGGET EYFSVLVKYD 1080 QQLQREVEIY RVKLPGELKL GEGKPENQNH ALIFTRGDAV QTIDMNQDNY FEEALKMRNL 1140 LEEFNRHYGI RKPKILGVRE HVFTGSVSSL AWFMSAQETS FVTLGQRVLA DPLKVRMHYG 1200 HPDVFDRLWF LGRGGISKAS KVINISEDIF AGFNCTLRGG NVTHHEYIQV GKGRDVGLNQ 1260 VSLFEAKVAS GNGEQTLSRD VYRLGHRLDF FRMLSFFYTT VGFYFNTMMV VLTVYAFVWG 1320 RFYLALSGLE DYISKNTSST NNAALGAVLN QQFVIQLGLF TALPMIIENS LEHGFLTAVW 1380 DFMKMQLQFA SVFYTFSMGT KTHYYGRTIL HGGAKYRATG RGFVVEHKKF AENYRLYARS 1440 HFVKAIELGV ILTLYASYGS ASGNTLVYIL LTLSSWFLVL SWILAPFIFN PSGLDWLKNF 1500 NDFEDFLNWI WFHGGISVKV DQSWEKWWED ETDHLRMTGL WGSILEIILD LRFFFFQYAI 1560 VYRLHIADQS RSILVYLLSW ACILLAFVAL VTVAYFRDRY SAKKHIRYRL VQAIIVVGTV 1620 AAIVVLLEFT KFQFVDTFTS LLAFLPTGWG IISIALVFKP YLRKSEVVWK TVVTVARLYD 1680 ILFGVIVMAP VALLSWLPGL QEMQTRILFN EAFSRGLHIS QIITGKKARA F* 1740 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam14288 | FKS1_dom1 | 3.0e-52 | 104 | 216 | 113 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 820 | 1607 | 854 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB84371.1 | 0 | 1 | 1730 | 35 | 1768 | 1,3-beta-glucan synthase component-like [Oryza sativa Japonica Group] |
| GenBank | EEC71251.1 | 0 | 1 | 1730 | 35 | 1704 | hypothetical protein OsI_03222 [Oryza sativa Indica Group] |
| RefSeq | NP_001044278.1 | 0 | 1 | 1730 | 37 | 1789 | Os01g0754200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002458298.1 | 0 | 216 | 1401 | 1 | 1186 | hypothetical protein SORBIDRAFT_03g030800 [Sorghum bicolor] |
| RefSeq | XP_002517915.1 | 0 | 1 | 1728 | 34 | 1767 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
