| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00022990m |
| Family | CE8 |
| Protein Properties | Length: 566 Molecular Weight: 62445.6 Isoelectric Point: 8.3209 |
| Chromosome | Chromosome/Scaffold: 003182 Start: 15551 End: 17654 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 244 | 540 | 0 |
| DVTVAADGSGDFRTINEALARVPRKSAAAYVMYVKAGTYREYVSVPRNVTNLVVIGDGATRTVVTGSKSFTMNITTKDTATMEVIGNGFLMRGVGVENTA GARNHQAVALRVQSDLSAFYECRFDGYQDTLYTHTSRQYYRDCVVTGTIDFIFGNAQVVLQNCRIQVRRCMDNQQNIVTAQGRKERRSAGGTVIHNCTVE PHPEFESSAGRLKTFLGRPWKEYARTLYIQSEIGGFVDPQGWLPWLGDFGLNTCYYAEVENRGAGADMSRRARWRGVRNVTYQQAQQKYTVERFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 566 Download |
| MKGAVIGAST VLVVLVIAGV CFVSFKGHGG KAEGEMSTSV RSIKSFCQPL DYRETCERAL 60 EATAGNATST TDLTKAIFLA TSDRIEQAVR ESAVLNALKN DPRTSAALRD CEELLDYAID 120 DLKITFDRLG GFQMANFKTA VDDLRTWLSS ALTYQETCLD GFENTTTDAA DKMRRALNSS 180 QELTENILAI VDEFSETLAS LDLPGFHRRL LADNYRGVPS WMSGAKRRQL QASASPGAPG 240 FKPDVTVAAD GSGDFRTINE ALARVPRKSA AAYVMYVKAG TYREYVSVPR NVTNLVVIGD 300 GATRTVVTGS KSFTMNITTK DTATMEVIGN GFLMRGVGVE NTAGARNHQA VALRVQSDLS 360 AFYECRFDGY QDTLYTHTSR QYYRDCVVTG TIDFIFGNAQ VVLQNCRIQV RRCMDNQQNI 420 VTAQGRKERR SAGGTVIHNC TVEPHPEFES SAGRLKTFLG RPWKEYARTL YIQSEIGGFV 480 DPQGWLPWLG DFGLNTCYYA EVENRGAGAD MSRRARWRGV RNVTYQQAQQ KYTVERFIQG 540 QQWLPKLGVP FIPGLLPQNQ TGRIH* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01095 | Pectinesterase | 4.0e-161 | 244 | 540 | 297 | + Pectinesterase. | ||
| PLN02990 | PLN02990 | 3.0e-161 | 2 | 552 | 565 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 2.0e-161 | 4 | 555 | 561 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 1.0e-180 | 2 | 555 | 585 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02217 | PLN02217 | 0 | 5 | 559 | 557 | + probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ05229.1 | 0 | 36 | 565 | 38 | 570 | hypothetical protein OsI_27427 [Oryza sativa Indica Group] |
| RefSeq | NP_001049858.1 | 0 | 31 | 565 | 34 | 565 | Os03g0300500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001060715.1 | 0 | 36 | 565 | 38 | 566 | Os07g0691100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002461260.1 | 0 | 30 | 565 | 34 | 571 | hypothetical protein SORBIDRAFT_02g043780 [Sorghum bicolor] |
| RefSeq | XP_002465396.1 | 0 | 31 | 565 | 34 | 568 | hypothetical protein SORBIDRAFT_01g037900 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 243 | 555 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 244 | 555 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 5e-17 | 255 | 547 | 18 | 341 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 5e-17 | 255 | 547 | 18 | 341 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 5e-17 | 255 | 547 | 18 | 341 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
