| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00023156m |
| Family | CE10 |
| Protein Properties | Length: 336 Molecular Weight: 36201.7 Isoelectric Point: 5.4124 |
| Chromosome | Chromosome/Scaffold: 002709 Start: 5753 End: 6760 |
| Description | alpha/beta-Hydrolases superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE10 | 43 | 329 | 0 |
| ATPVRDDGSVEWKDATFDAARGLGLRLYRPRDWGRRLPVFFYYHGGGFCIGSRAWPNCQNYCLRLAADLGALVVAPDYRLAPEHRLPAAIDDGAAAVLWL AAQARGGGGDPWVAQSADLARVFVSGDSAGGNIAHHLAVRFGSPAGREELAPAAVRGYVQLMPFFGGTERTRSEAECPDDAFLNRPLNDRYWRLSLPEGA TPEHPVANPFGPGAPALEAVEIAPTMVVVGGRDILHDRAVDYAARLKAMGKAVEVRDFEGQQHGFFTIDPWSDASAELMRVIKRFVD | |||
| Full Sequence |
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| Protein Sequence Length: 336 Download |
| MESSEAAAPP AGDPAPHVVD ECRSVLFVYS DGTVVRRAAP GFATPVRDDG SVEWKDATFD 60 AARGLGLRLY RPRDWGRRLP VFFYYHGGGF CIGSRAWPNC QNYCLRLAAD LGALVVAPDY 120 RLAPEHRLPA AIDDGAAAVL WLAAQARGGG GDPWVAQSAD LARVFVSGDS AGGNIAHHLA 180 VRFGSPAGRE ELAPAAVRGY VQLMPFFGGT ERTRSEAECP DDAFLNRPLN DRYWRLSLPE 240 GATPEHPVAN PFGPGAPALE AVEIAPTMVV VGGRDILHDR AVDYAARLKA MGKAVEVRDF 300 EGQQHGFFTI DPWSDASAEL MRVIKRFVDS DGRFD* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| cd00312 | Esterase_lipase | 0.001 | 65 | 189 | 138 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| COG2272 | PnbA | 5.0e-6 | 64 | 125 | 62 | + Carboxylesterase type B [Lipid metabolism] |
| PRK10162 | PRK10162 | 6.0e-8 | 68 | 176 | 110 | + acetyl esterase; Provisional |
| COG0657 | Aes | 5.0e-35 | 35 | 330 | 299 | + Esterase/lipase [Lipid metabolism] |
| pfam07859 | Abhydrolase_3 | 4.0e-62 | 82 | 308 | 227 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI24401.1 | 0 | 15 | 328 | 20 | 329 | unnamed protein product [Vitis vinifera] |
| GenBank | EAZ02867.1 | 0 | 18 | 332 | 7 | 322 | hypothetical protein OsI_24998 [Oryza sativa Indica Group] |
| RefSeq | NP_001058951.1 | 0 | 18 | 332 | 7 | 322 | Os07g0162900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002277507.1 | 0 | 15 | 328 | 3 | 312 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002461501.1 | 0 | 11 | 335 | 2 | 327 | hypothetical protein SORBIDRAFT_02g003630 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ed1_F | 1.00053e-42 | 32 | 331 | 45 | 350 | A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus |
| PDB | 3ed1_E | 1.00053e-42 | 32 | 331 | 45 | 350 | A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus |
| PDB | 3ed1_D | 1.00053e-42 | 32 | 331 | 45 | 350 | A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus |
| PDB | 3ed1_C | 1.00053e-42 | 32 | 331 | 45 | 350 | A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus |
| PDB | 3ed1_B | 1.00053e-42 | 32 | 331 | 45 | 350 | A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
| isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FL908143 | 235 | 78 | 312 | 0 |
| EE046334 | 259 | 18 | 271 | 0 |
| EC894209 | 257 | 18 | 269 | 0 |
| FL950122 | 233 | 17 | 247 | 0 |
| GR359490 | 247 | 25 | 270 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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