| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00023302m |
| Family | GT43 |
| Protein Properties | Length: 447 Molecular Weight: 50668.1 Isoelectric Point: 7.6978 |
| Chromosome | Chromosome/Scaffold: 002552 Start: 4474 End: 8185 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT43 | 214 | 422 | 0 |
| LAHVLKNVPPPLLWIVAEWPYQSRETAAILRSSGVMYRHLICNRNTTNIRKIIVCQKNNAIFHIKKHRLDGIVHFADEERTYSVDLFEEMRKIRRFGTWP VAIHVGARYRVVLEGPLCRGSQVTGWHTNQRRGVPRRFPIGFSGFAFNSTILWDPQRWNSPTLESIILHSGGRGGLQESRFIEKLVEDETQMEGLADNCS RVMVWNFDL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 447 Download |
| MARRNAGAMP REGSAGSVKD WSEFDPSPSP KLAYSQSYVA MRGLLTSVAS LDPILMSSSL 60 KSLWGALSSH RHARSLERPK YKGVNWRRPM VHLLVCFLVG IFIGFTPLFS VDLSNKIDSE 120 DEMLPFDGDV VDRQMLELKS TKLEPFAVET EAVEEQQVDE SPPVPAMLDD EVDFIEASHV 180 VSSVNDSDIV VRKQLIIVTA TSVRPHQAYY LNRLAHVLKN VPPPLLWIVA EWPYQSRETA 240 AILRSSGVMY RHLICNRNTT NIRKIIVCQK NNAIFHIKKH RLDGIVHFAD EERTYSVDLF 300 EEMRKIRRFG TWPVAIHVGA RYRVVLEGPL CRGSQVTGWH TNQRRGVPRR FPIGFSGFAF 360 NSTILWDPQR WNSPTLESII LHSGGRGGLQ ESRFIEKLVE DETQMEGLAD NCSRVMVWNF 420 DLEPPQLHYP TGWLLQKNLD VVVPIT* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03360 | Glyco_transf_43 | 5.0e-58 | 214 | 418 | 214 | + Glycosyltransferase family 43. | ||
| PLN02458 | PLN02458 | 4.0e-72 | 75 | 432 | 371 | + transferase, transferring glycosyl groups | ||
| cd00218 | GlcAT-I | 3.0e-94 | 195 | 424 | 236 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAI93179.1 | 0 | 2 | 446 | 4 | 448 | glycosyltransferase [Saccharum officinarum] |
| GenBank | EAY75350.1 | 0 | 1 | 446 | 1 | 446 | hypothetical protein OsI_03246 [Oryza sativa Indica Group] |
| RefSeq | NP_001043846.1 | 0 | 1 | 446 | 1 | 446 | Os01g0675500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151473.1 | 0 | 1 | 446 | 1 | 448 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 [Zea mays] |
| RefSeq | XP_002458309.1 | 0 | 1 | 446 | 1 | 448 | hypothetical protein SORBIDRAFT_03g030990 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v84_B | 3e-23 | 197 | 427 | 7 | 238 | A Chain A, Structural Basis For Dsrna Duplex Backbone Recognition By Mda5 |
| PDB | 1v84_A | 3e-23 | 197 | 427 | 7 | 238 | A Chain A, Structural Basis For Dsrna Duplex Backbone Recognition By Mda5 |
| PDB | 1v83_B | 3e-23 | 197 | 427 | 7 | 238 | A Chain A, Structural Basis For Dsrna Duplex Backbone Recognition By Mda5 |
| PDB | 1v83_A | 3e-23 | 197 | 427 | 7 | 238 | A Chain A, Structural Basis For Dsrna Duplex Backbone Recognition By Mda5 |
| PDB | 1v82_B | 3e-23 | 197 | 427 | 7 | 238 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
