| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00023661m |
| Family | GH5 |
| Protein Properties | Length: 537 Molecular Weight: 59140.9 Isoelectric Point: 8.0418 |
| Chromosome | Chromosome/Scaffold: 002881 Start: 731 End: 4533 |
| Description | Cellulase (glycosyl hydrolase family 5) protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 42 | 356 | 2.4e-36 |
| VGADGRRVKLACANWASHLEPAAAEGLARRGVGDIAARVAGMGFNCVRLTWPTYLATNGTLASLPFRWSLERLGLRESVAGVRVNNPALLDLPLIDVFRE VISALAGKGIMVILDNQMTTPGWCCSRTDGDGFFGDKYFDPNEWLKGLRAMATMFNDTKNVVGMSLRNELRGPNQNVSLWYRYMALGAEAVHAANPNLLV ILSGLDFDNTLSFLHSKKAELQFTGKLVYEQHWYGFSDGGNWEIRNQNDACRMVVDSIWAKGLFLLQQGWPLFFSEFGFDMSGTHIGDNRNLTCFLKKLF LAYDESYGLLSWDWC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 537 Download |
| MAASTSPSPL LLAVLFLHLL PTLLAAASLP ELPLSTASRW VVGADGRRVK LACANWASHL 60 EPAAAEGLAR RGVGDIAARV AGMGFNCVRL TWPTYLATNG TLASLPFRWS LERLGLRESV 120 AGVRVNNPAL LDLPLIDVFR EVISALAGKG IMVILDNQMT TPGWCCSRTD GDGFFGDKYF 180 DPNEWLKGLR AMATMFNDTK NVVGMSLRNE LRGPNQNVSL WYRYMALGAE AVHAANPNLL 240 VILSGLDFDN TLSFLHSKKA ELQFTGKLVY EQHWYGFSDG GNWEIRNQND ACRMVVDSIW 300 AKGLFLLQQG WPLFFSEFGF DMSGTHIGDN RNLTCFLKKL FLAYDESYGL LSWDWCTARN 360 PSFIKRINSL QTPFQGPGLP NSREPYNVIF HPQTGLCVLA KPSKSLELGP CDESNAWNYT 420 SAYERVVKST GQCLQAKFVG ENAKLGTDCS KPSSKWQLIS NSRMHVSAEL TKNKTRVCLD 480 ASPAGAIMTN QCKCLSVDPT CNPESQWFKI ILSSRDTPGG SSILQLPSVQ EQLIFM* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 2.0e-10 | 75 | 356 | 289 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAD41089.2 | 0 | 35 | 528 | 30 | 540 | OSJNBb0011N17.6 [Oryza sativa (japonica cultivar-group)] |
| EMBL | CAH67676.1 | 0 | 35 | 528 | 33 | 543 | H0510A06.1 [Oryza sativa (indica cultivar-group)] |
| GenBank | EAY94563.1 | 0 | 35 | 528 | 30 | 542 | hypothetical protein OsI_16341 [Oryza sativa Indica Group] |
| RefSeq | NP_001132121.1 | 0 | 36 | 529 | 31 | 545 | hypothetical protein LOC100193538 [Zea mays] |
| RefSeq | XP_002446674.1 | 0 | 35 | 529 | 31 | 546 | hypothetical protein SORBIDRAFT_06g020260 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 0.000002 | 36 | 325 | 8 | 290 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.000002 | 36 | 325 | 8 | 290 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 0.00001 | 36 | 278 | 8 | 243 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.00001 | 36 | 278 | 8 | 243 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 4dm1_C | 0.002 | 41 | 210 | 20 | 168 | A Chain A, Contribution Of Disulfide Bond Toward Thermostability In Hyperthermostable Endocellulase |
