Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00023974m |
Family | GH17 |
Protein Properties | Length: 391 Molecular Weight: 41489.4 Isoelectric Point: 5.8852 |
Chromosome | Chromosome/Scaffold: 003813 Start: 12734 End: 14919 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 41 | 356 | 0 |
GINYGQIANNLPHPAQVSGLLQSLNVNRVKLYDADPAVLTAFAGTGVEFIVGNEDLQNLTDARKARAWVAQHVQPFLPGTRITCITVGNEVLSGKDTAAM QNLLPAMQAVHQAVADLGLAGQVNVSTAHSVNILASSYPPSSGAFREELAQYIQPILNFHAEVRSPFLVNAYPFFAYKASPGSVSLPYVLFEPNPGVVDP NTNLTYDNMLYAQIDAVYAAMKAMGHTDLTVRISETGWPSKGDDDEVGATVANAAAYNGNLMKRIAMGQGTPLKPDVPIDVFVFALFNEDMKPGPASERN YGLFYPNGTPVYNLGF |
Full Sequence |
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Protein Sequence Length: 391 Download |
MAPAAELRAV AVRVVPLLLL ALLAVSAVDV VSAAAAPHKF GINYGQIANN LPHPAQVSGL 60 LQSLNVNRVK LYDADPAVLT AFAGTGVEFI VGNEDLQNLT DARKARAWVA QHVQPFLPGT 120 RITCITVGNE VLSGKDTAAM QNLLPAMQAV HQAVADLGLA GQVNVSTAHS VNILASSYPP 180 SSGAFREELA QYIQPILNFH AEVRSPFLVN AYPFFAYKAS PGSVSLPYVL FEPNPGVVDP 240 NTNLTYDNML YAQIDAVYAA MKAMGHTDLT VRISETGWPS KGDDDEVGAT VANAAAYNGN 300 LMKRIAMGQG TPLKPDVPID VFVFALFNED MKPGPASERN YGLFYPNGTP VYNLGFNGAS 360 FSRSPTFSSS SKPTTTFLMA VVVLLAGFFL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-9 | 41 | 347 | 322 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 7.0e-98 | 41 | 356 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG28556.1 | 0 | 5 | 388 | 6 | 395 | glucan endo-1,3-beta-glucosidase 7 precursor [Zea mays] |
GenBank | EEC79302.1 | 0 | 30 | 390 | 29 | 393 | hypothetical protein OsI_20133 [Oryza sativa Indica Group] |
GenBank | EEE63886.1 | 0 | 70 | 390 | 36 | 359 | hypothetical protein OsJ_18711 [Oryza sativa Japonica Group] |
RefSeq | NP_001131225.1 | 0 | 5 | 388 | 6 | 394 | hypothetical protein LOC100192534 [Zea mays] |
RefSeq | XP_002441180.1 | 0 | 37 | 390 | 55 | 410 | hypothetical protein SORBIDRAFT_09g021800 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 41 | 357 | 3 | 316 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 3f55_C | 0 | 41 | 357 | 3 | 316 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 3f55_B | 0 | 41 | 357 | 3 | 316 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 3f55_A | 0 | 41 | 357 | 3 | 316 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 3em5_D | 0 | 41 | 357 | 3 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |