| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00024018m |
| Family | CE6 |
| Protein Properties | Length: 248 Molecular Weight: 26604.3 Isoelectric Point: 5.7925 |
| Chromosome | Chromosome/Scaffold: 003198 Start: 6906 End: 9531 |
| Description | Domain of unknown function (DUF303) |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE6 | 67 | 171 | 2.4e-28 |
| PGMVFARAVLPCLQEGTSVEGARAGTGIGIGLVPCAVGGTAIREWARGERLYEQMVCRARVAARYGEIEAVLWYQGESDAESDAAAAAYRGNIERLIANV RADLG | |||
| Full Sequence |
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| Protein Sequence Length: 248 Download |
| MRIFVLSGQS NMAGRGGVHR RRWDGVVPPE GAPDPSIQRL SAALDWEEAR EPLHADIDTA 60 KTCGVGPGMV FARAVLPCLQ EGTSVEGARA GTGIGIGLVP CAVGGTAIRE WARGERLYEQ 120 MVCRARVAAR YGEIEAVLWY QGESDAESDA AAAAYRGNIE RLIANVRADL GMPQLPFIQV 180 ALASGDKRNI EKVRSAQFRV NLPNVVTVDA MGLALNEDNL HLTTESQVKL GNMLAEAYIK 240 NFLTTTC* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03629 | DUF303 | 3.0e-33 | 3 | 241 | 288 | + Domain of unknown function (DUF303). Distribution of this domain seems limited to prokaryotes and viruses. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG48250.1 | 0 | 1 | 247 | 1 | 241 | receptor protein kinase-like protein [Zea mays] |
| EMBL | CAH67955.1 | 0 | 1 | 247 | 1 | 237 | H0117D06-OSIGBa0088B06.7 [Oryza sativa (indica cultivar-group)] |
| RefSeq | NP_001052354.1 | 0 | 1 | 247 | 1 | 237 | Os04g0276600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001146996.1 | 0 | 1 | 247 | 1 | 243 | receptor protein kinase-like protein [Zea mays] |
| RefSeq | XP_002447605.1 | 0 | 1 | 247 | 1 | 243 | hypothetical protein SORBIDRAFT_06g006110 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2apj_D | 0 | 2 | 242 | 23 | 259 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_C | 0 | 2 | 242 | 23 | 259 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_B | 0 | 2 | 242 | 23 | 259 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 2apj_A | 0 | 2 | 242 | 23 | 259 | A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At4g34215 At 1.6 Angstrom Resolution |
| PDB | 1zmb_F | 4e-20 | 1 | 239 | 2 | 225 | A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase From Clostridium Acetobutylicum, Northeast Structural Genomics Target Car6 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| FE633950 | 234 | 15 | 248 | 0 |
| FE637100 | 234 | 15 | 248 | 0 |
| DR965947 | 248 | 1 | 248 | 0 |
| DV533127 | 248 | 1 | 248 | 0 |
| CX617635 | 228 | 1 | 228 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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