| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00024177m |
| Family | GH47 |
| Protein Properties | Length: 564 Molecular Weight: 63993.2 Isoelectric Point: 6.1209 |
| Chromosome | Chromosome/Scaffold: 003287 Start: 11624 End: 17637 |
| Description | alpha-mannosidase 1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH47 | 105 | 536 | 0 |
| AMLHAWNSYVKYAWGMDELQPQSKNGINSFGGLGATLVDSLDTLYIMGLKDEFQKARDWVAESLDFDKDYDASVFETTIRVVGGLLSAYDLSGDKVFLEK AKDITDRLLPAWETTSGIPYNRINLAHGRAHNPGWTNGDSILADSGTEQLEFIALSQRTGDPKYQQKAENVITQLQKIYPSDGLLPIYINPHSGTASYST ITFGAMGDSFYEYLLKVWIQGNKTEHVKHYRQMWETSMEGLISLTKKTTPSNYHYICEKNGGSLSDKMDELACFAPGMLALGASGYGPEKSEQIMNLAKE LARTCYNFYQTTPTKLAGENYFFHAGQDMSVGTSWNILRPETVESLMYLWRLTGNKTYQDWGWDIFQAFEKNSRIESGYVGLRDVNTGEKDNMMQSFFLA ETLKYLYLLFSPPSVISFDEWVFNTEAHPLRI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 564 Download |
| MARRSSSSSS GAWRYLNPAY YLKRPKRLAL LFFVFVAATF AFWDRQSLVR EYESEISRLE 60 DDINRLHDQL RKAGVHVDEN PSNARKDLVE IDPVNNERRE KVKEAMLHAW NSYVKYAWGM 120 DELQPQSKNG INSFGGLGAT LVDSLDTLYI MGLKDEFQKA RDWVAESLDF DKDYDASVFE 180 TTIRVVGGLL SAYDLSGDKV FLEKAKDITD RLLPAWETTS GIPYNRINLA HGRAHNPGWT 240 NGDSILADSG TEQLEFIALS QRTGDPKYQQ KAENVITQLQ KIYPSDGLLP IYINPHSGTA 300 SYSTITFGAM GDSFYEYLLK VWIQGNKTEH VKHYRQMWET SMEGLISLTK KTTPSNYHYI 360 CEKNGGSLSD KMDELACFAP GMLALGASGY GPEKSEQIMN LAKELARTCY NFYQTTPTKL 420 AGENYFFHAG QDMSVGTSWN ILRPETVESL MYLWRLTGNK TYQDWGWDIF QAFEKNSRIE 480 SGYVGLRDVN TGEKDNMMQS FFLAETLKYL YLLFSPPSVI SFDEWVFNTE AHPLRIVPIH 540 DNKGIGTPAR PFGPLGRKQG KPE* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01532 | Glyco_hydro_47 | 0 | 105 | 536 | 451 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| PTZ00470 | PTZ00470 | 0 | 79 | 538 | 472 | + glycoside hydrolase family 47 protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN34773.1 | 0 | 1 | 563 | 1 | 565 | unknown [Zea mays] |
| EMBL | CAH66776.1 | 0 | 1 | 563 | 1 | 572 | OSIGBa0113I13.2 [Oryza sativa (indica cultivar-group)] |
| EMBL | CBI18472.1 | 0 | 1 | 561 | 1 | 571 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001053800.1 | 0 | 1 | 563 | 1 | 572 | Os04g0606400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002448484.1 | 0 | 1 | 563 | 1 | 564 | hypothetical protein SORBIDRAFT_06g027810 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nxc_A | 0 | 92 | 537 | 14 | 466 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 1fmi_A | 0 | 93 | 536 | 4 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo3_A | 0 | 93 | 536 | 4 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo2_A | 0 | 93 | 536 | 4 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1x9d_A | 0 | 93 | 536 | 82 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
