| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00024205m |
| Family | GT14 |
| Protein Properties | Length: 426 Molecular Weight: 47104.9 Isoelectric Point: 7.4776 |
| Chromosome | Chromosome/Scaffold: 002201 Start: 4947 End: 7671 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT14 | 74 | 334 | 0 |
| IAFLISGSAGDASALRRVLLALYHPRNRYILHLDAEAPVSDRTDLAAGLAAHPVLASADNVRVVNRANLITYRGPTMVANTLHAAAAFLWGHAGAGGSDW NWFINLSASDYPLVTQDDLIHVFSKLPRDLNFIDHTSDIGWKEFQRAKPVIIDPGLYMKKKADVFWIPQRRSVPTAFKLFTGSAWMALSRPFVEYCIWGW DNLPRTVLMYYSNFISSPEGYFHTVVCNAEEFKNTTVNHDLHYISWDNPPKQHPHYLTVED | |||
| Full Sequence |
|---|
| Protein Sequence Length: 426 Download |
| MKALISQSFH AAVDRRWLLP LAVGSALSLL LLVALTTFPL PFPSSSSSAA SALFVEHKLA 60 PTPPFPAGAE LPRIAFLISG SAGDASALRR VLLALYHPRN RYILHLDAEA PVSDRTDLAA 120 GLAAHPVLAS ADNVRVVNRA NLITYRGPTM VANTLHAAAA FLWGHAGAGG SDWNWFINLS 180 ASDYPLVTQD DLIHVFSKLP RDLNFIDHTS DIGWKEFQRA KPVIIDPGLY MKKKADVFWI 240 PQRRSVPTAF KLFTGSAWMA LSRPFVEYCI WGWDNLPRTV LMYYSNFISS PEGYFHTVVC 300 NAEEFKNTTV NHDLHYISWD NPPKQHPHYL TVEDLDRMVA SDAPFARKFH ADDPVLDKID 360 EEILSRGADM PTPGGWCAGT RENGSDPCSV IGDTSLLRPG RGAVRLQRLI TSLLSEEKFH 420 PRQCK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 1.0e-75 | 74 | 339 | 270 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 0 | 58 | 425 | 368 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS88559.1 | 0 | 52 | 425 | 49 | 425 | glycosylation enzyme-like protein [Triticum monococcum] |
| GenBank | AAV49991.1 | 0 | 1 | 425 | 1 | 425 | putative N-acetylglucosaminyltransferase [Hordeum vulgare subsp. vulgare] |
| EMBL | CAH05144.1 | 0 | 52 | 425 | 49 | 425 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Aegilops tauschii] |
| EMBL | CAH10066.1 | 0 | 52 | 425 | 49 | 425 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Triticum turgidum] |
| RefSeq | XP_002442623.1 | 0 | 53 | 425 | 53 | 425 | hypothetical protein SORBIDRAFT_08g023170 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.0000005 | 88 | 368 | 99 | 385 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.0000005 | 88 | 368 | 99 | 385 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.0000005 | 88 | 368 | 99 | 385 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.0000005 | 88 | 368 | 99 | 385 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.000001 | 88 | 368 | 99 | 385 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
