Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00024442m |
Family | CE16 |
Protein Properties | Length: 366 Molecular Weight: 39440.6 Isoelectric Point: 10.2231 |
Chromosome | Chromosome/Scaffold: 002293 Start: 19900 End: 21804 |
Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE16 | 139 | 356 | 2.9e-22 |
AIPLSQQLEYFKEYQSKLAAVAGAGQARSIVTGALYIISFGASDFVQNYYINPLLFKTQTADQFSDRLVGIFSNTVSQLYGMGARRIGVTSLPPLGCLPA SITLFGHGGDGCVARLNRDSQSFNRKMNATVDALSSRYPDLKIAVFDIYTPLYDLATDPQAQGFTEARRGCCGTGTVETTVLLCNPKSVGTCPNATSYVF WDAVHPSEAANQVIADSL |
Full Sequence |
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Protein Sequence Length: 366 Download |
MPWGPEHSSD GSGGDGAGEV PAGRGAAPRG GDPRRRRAAA GAGGDDVRRL VGGRREQRLP 60 PHHHQGQLPA LRQGLRQPRR HGAVLQRQAR HRHHRRHAGV HHLPGGVPQP AGVRAEPSDR 120 RQLRVCRIRI LRPHGTHHAI PLSQQLEYFK EYQSKLAAVA GAGQARSIVT GALYIISFGA 180 SDFVQNYYIN PLLFKTQTAD QFSDRLVGIF SNTVSQLYGM GARRIGVTSL PPLGCLPASI 240 TLFGHGGDGC VARLNRDSQS FNRKMNATVD ALSSRYPDLK IAVFDIYTPL YDLATDPQAQ 300 GFTEARRGCC GTGTVETTVL LCNPKSVGTC PNATSYVFWD AVHPSEAANQ VIADSLITEG 360 LVLVT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3240 | COG3240 | 2.0e-9 | 172 | 357 | 186 | + Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] | ||
pfam00657 | Lipase_GDSL | 1.0e-14 | 172 | 356 | 191 | + GDSL-like Lipase/Acylhydrolase. | ||
cd01846 | fatty_acyltransferase_like | 6.0e-31 | 172 | 354 | 183 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
PLN03156 | PLN03156 | 3.0e-55 | 140 | 357 | 219 | + GDSL esterase/lipase; Provisional | ||
cd01837 | SGNH_plant_lipase_like | 2.0e-73 | 139 | 358 | 220 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. |
Gene Ontology | |
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GO Term | Description |
GO:0006629 | lipid metabolic process |
GO:0016788 | hydrolase activity, acting on ester bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU24285.1 | 0 | 137 | 365 | 126 | 354 | unknown [Glycine max] |
RefSeq | NP_001056808.1 | 0 | 137 | 365 | 123 | 351 | Os06g0148200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001136705.1 | 0 | 137 | 349 | 129 | 341 | hypothetical protein LOC100216840 [Zea mays] |
RefSeq | XP_002283363.1 | 0 | 138 | 364 | 129 | 355 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002436473.1 | 0 | 137 | 365 | 132 | 360 | hypothetical protein SORBIDRAFT_10g003340 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3kvn_A | 0.00003 | 172 | 354 | 148 | 310 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
PDB | 3kvn_X | 0.00003 | 172 | 354 | 148 | 310 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
triacylglycerol degradation | TRIACYLGLYCEROL-LIPASE-RXN | EC-3.1.1.3 | triacylglycerol lipase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR821175 | 217 | 150 | 366 | 0 |
FL753802 | 200 | 56 | 255 | 0 |
GO840252 | 230 | 137 | 366 | 0 |
HO147093 | 230 | 137 | 366 | 0 |
DT941500 | 208 | 159 | 366 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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