| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00024467m |
| Family | GT8 |
| Protein Properties | Length: 625 Molecular Weight: 71419.4 Isoelectric Point: 9.1992 |
| Chromosome | Chromosome/Scaffold: 002437 Start: 16015 End: 20833 |
| Description | galacturonosyltransferase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT8 | 295 | 596 | 0 |
| CLNMRLTLEYFKSSSFDSDDSPSGKFSSPKYMHYVILSKNVLAASVVINSTVSSCKDPGNLAFHILTDAQNFYAMKHWFARNSYKNAVIHVLNYEAIILE KLPKDNIQQLYLPEEFRVLIRSIKQPTENTRMEYLSLFSHSHFLIPEIFKYLNKVVLLDDDVVVQRDLSFLWNIDMGDKVNGAVKFCGLKLGQMRNVLGK TAYDPKSCAWMSGVNLINLDKWREHNVTENYLLLMKKFKFKDERSLQAAAIPLSLLSFQHLIYPLDEKLTLAGLGYDYGIDEEVAQRAASLHYNGNMKPW LE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 625 Download |
| MKAQPLLPAA LKRRRGPRVA VLALVFCSLL VPFAFLFDRA PSSGYVTTEE RHRQEVVLPS 60 LDHVDAPEKK IPISSDQNIP EKRISKGSAG VIDQHKQIDS HSRSGGAKPK VLPAPKVEPS 120 KVVAESTRET REISKDVQGQ QKVAKADEVE KAKACQLEFG SYCLWSIEHK EVMKDSIVKR 180 LKDQLFVARS YYPSIAKLQG YEALTQEMKQ NIQEHERVLS VSTVDADLPS FINKRMEQME 240 RTIARSKSCT VDCKNVDRKL RQILDMTEDE AHFHMKQSAF LYNLGAQTLQ KSHHCLNMRL 300 TLEYFKSSSF DSDDSPSGKF SSPKYMHYVI LSKNVLAASV VINSTVSSCK DPGNLAFHIL 360 TDAQNFYAMK HWFARNSYKN AVIHVLNYEA IILEKLPKDN IQQLYLPEEF RVLIRSIKQP 420 TENTRMEYLS LFSHSHFLIP EIFKYLNKVV LLDDDVVVQR DLSFLWNIDM GDKVNGAVKF 480 CGLKLGQMRN VLGKTAYDPK SCAWMSGVNL INLDKWREHN VTENYLLLMK KFKFKDERSL 540 QAAAIPLSLL SFQHLIYPLD EKLTLAGLGY DYGIDEEVAQ RAASLHYNGN MKPWLELGIP 600 DYKKYWRRFL VRGDRFMDVC NVNP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02910 | PLN02910 | 2.0e-83 | 160 | 623 | 483 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| cd06429 | GT8_like_1 | 1.0e-85 | 327 | 611 | 286 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
| PLN02718 | PLN02718 | 6.0e-86 | 14 | 622 | 636 | + Probable galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 1.0e-95 | 172 | 624 | 469 | + Probable galacturonosyltransferase | ||
| PLN02769 | PLN02769 | 0 | 1 | 623 | 628 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY89863.1 | 0 | 1 | 622 | 1 | 629 | hypothetical protein OsI_11412 [Oryza sativa Indica Group] |
| GenBank | EEC82698.1 | 0 | 12 | 624 | 15 | 626 | hypothetical protein OsI_27362 [Oryza sativa Indica Group] |
| RefSeq | NP_001050007.1 | 0 | 1 | 624 | 1 | 631 | Os03g0330000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001060656.1 | 0 | 19 | 624 | 21 | 625 | Os07g0681700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002461225.1 | 0 | 1 | 624 | 1 | 627 | hypothetical protein SORBIDRAFT_02g043170 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ss9_A | 0.00008 | 426 | 542 | 76 | 194 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1ga8_A | 0.0002 | 426 | 521 | 76 | 169 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1g9r_A | 0.0002 | 426 | 521 | 76 | 169 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
