y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00024569m |
Family | GT8 |
Protein Properties | Length: 642 Molecular Weight: 73302.5 Isoelectric Point: 9.6876 |
Chromosome | Chromosome/Scaffold: 002287 Start: 3217 End: 7506 |
Description | galacturonosyltransferase 7 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 312 | 613 | 0 |
CLNMRLTLEYFKSSSLDSDDSPSGKFNSPKYMHYVILSKNVLAASVVINSTVSSCKEPGNLAFHILTDAQNFYAMKYWFARNSYKNAVIHVINYEAIILE KLPKYNIQQLYLPEEFRVLIRSIKQPTENTRMEYLSLFSHSHFLIPEIFKYLNKVVLLDDDVVVQRDLSFLWNIDMGDKVNGAVKFCGLKLGQMRNVLGK TAYDPKSCAWMSGVNLINLDKWREHNVTENYLLLMKKFKFKDERSLRAAAIPLSSLSFQHLIYPLDEKLTLAGLGYDYGIDEEVARRAASLHYNGNMKPW LE |
Full Sequence |
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Protein Sequence Length: 642 Download |
MKAQPLLPAA LKRRRGPRVA VLALVFCSLL VPFAFLFDRA PSGYVTTEER HRQEVVLPSL 60 DHAEKRGRPG AISGRRQDAP EKKIPRGSAG VIHQHVPEKR ISKVSAGVID QHKQIDSHST 120 SGGAKSKALP APKVEPSKAV AESTRETREI SKDVQGRQKV AKADEVEKAK ACQLEFGSYC 180 LWSIEHKEVM KDSIVKRLKD QLFVARSYYP SIAKLQGHEA LTQEMKQNIQ EHERVLSVST 240 VDADLPSFIN KRMEQMERTI ARSKSCTVDC KNVDRKLRQI LDMTEDEAHF HMKQSAFLYN 300 LGAQTLQKSH HCLNMRLTLE YFKSSSLDSD DSPSGKFNSP KYMHYVILSK NVLAASVVIN 360 STVSSCKEPG NLAFHILTDA QNFYAMKYWF ARNSYKNAVI HVINYEAIIL EKLPKYNIQQ 420 LYLPEEFRVL IRSIKQPTEN TRMEYLSLFS HSHFLIPEIF KYLNKVVLLD DDVVVQRDLS 480 FLWNIDMGDK VNGAVKFCGL KLGQMRNVLG KTAYDPKSCA WMSGVNLINL DKWREHNVTE 540 NYLLLMKKFK FKDERSLRAA AIPLSSLSFQ HLIYPLDEKL TLAGLGYDYG IDEEVARRAA 600 SLHYNGNMKP WLELGIPDYK KYWRRFLVRG DRFMDECNVN P* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd06429 | GT8_like_1 | 2.0e-82 | 344 | 628 | 286 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
PLN02910 | PLN02910 | 1.0e-86 | 117 | 640 | 553 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02718 | PLN02718 | 3.0e-88 | 14 | 639 | 642 | + Probable galacturonosyltransferase | ||
PLN02829 | PLN02829 | 2.0e-99 | 189 | 641 | 469 | + Probable galacturonosyltransferase | ||
PLN02769 | PLN02769 | 0 | 1 | 640 | 645 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY89863.1 | 0 | 1 | 639 | 1 | 629 | hypothetical protein OsI_11412 [Oryza sativa Indica Group] |
GenBank | EEC82698.1 | 0 | 12 | 641 | 15 | 626 | hypothetical protein OsI_27362 [Oryza sativa Indica Group] |
RefSeq | NP_001050007.1 | 0 | 1 | 641 | 1 | 631 | Os03g0330000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001060656.1 | 0 | 19 | 641 | 21 | 625 | Os07g0681700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002461225.1 | 0 | 1 | 641 | 1 | 627 | hypothetical protein SORBIDRAFT_02g043170 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.00008 | 443 | 559 | 76 | 194 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.0002 | 443 | 538 | 76 | 169 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.0002 | 443 | 538 | 76 | 169 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |