| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00024588m |
| Family | GT66 |
| Protein Properties | Length: 783 Molecular Weight: 86659 Isoelectric Point: 9.413 |
| Chromosome | Chromosome/Scaffold: 002789 Start: 6785 End: 12934 |
| Description | staurosporin and temperature sensitive 3-like A |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT66 | 26 | 711 | 0 |
| CAFTLLLIGVVAFSIRLFSVIKYESVIHEFDPYFNFRVTQFLSKNGIYEFWNWFDDRTWYPLGRVIGGTVYPGLTLTAGTIWWLVNSLNIPLSVETVCVF TAPIFSANASWATYLLTKEAKGTGAGLMAAAILAMVPSYISRSVAGSYDNEAVAIFALIFTFYLYVKTLNTGSLFYATLNALSYFYMVCSWGGYTFIINL IPMHVLLCIVTGRYSSRLYIAYAPLVILGTLLAALVPVVGFNAVMTSEHFASFLVFIILHVVALVYYIKGLLSPRLFKVAMTLVISVGLAVCFAVVAVLV ALVASSPTKGWSGRSLSLLDPTYASKYIPIIASVSEHQPPTWPSYFMDINVLAFLIPAGIISCFLPLSDASSFMVLYLVTAVYFSGVMVRLMLVLAPAAC ILSGIALSEVFGVLTRSIKFQLSKLFDDSSAASGDSSSESSTNSAKSETRNEKSETAPKEKPSKKNRKKEKEVAESVPVKTKKEKRLLVLPFELSVMGIL LLIVLGGFYVVHCVWAAAEAYSAPSIVLTSRSRDGLHVFDDFREAYAWLSHNTDVDDKVASWWDYGYQTTAMANRTVIVDNNTWNNTHIATVGTAMSSPE KAAWEIFNSLDVKYVLVVFGGLVGYPSDDINKFLWMVRIGGGVFPHIKEPDYLRDGQYRVDAQATPTMLNCLMYKLCYYRFVETDG | |||
| Full Sequence |
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| Protein Sequence Length: 783 Download |
| MAEPEVSSAA AGGGGRLRNA FGGVLCAFTL LLIGVVAFSI RLFSVIKYES VIHEFDPYFN 60 FRVTQFLSKN GIYEFWNWFD DRTWYPLGRV IGGTVYPGLT LTAGTIWWLV NSLNIPLSVE 120 TVCVFTAPIF SANASWATYL LTKEAKGTGA GLMAAAILAM VPSYISRSVA GSYDNEAVAI 180 FALIFTFYLY VKTLNTGSLF YATLNALSYF YMVCSWGGYT FIINLIPMHV LLCIVTGRYS 240 SRLYIAYAPL VILGTLLAAL VPVVGFNAVM TSEHFASFLV FIILHVVALV YYIKGLLSPR 300 LFKVAMTLVI SVGLAVCFAV VAVLVALVAS SPTKGWSGRS LSLLDPTYAS KYIPIIASVS 360 EHQPPTWPSY FMDINVLAFL IPAGIISCFL PLSDASSFMV LYLVTAVYFS GVMVRLMLVL 420 APAACILSGI ALSEVFGVLT RSIKFQLSKL FDDSSAASGD SSSESSTNSA KSETRNEKSE 480 TAPKEKPSKK NRKKEKEVAE SVPVKTKKEK RLLVLPFELS VMGILLLIVL GGFYVVHCVW 540 AAAEAYSAPS IVLTSRSRDG LHVFDDFREA YAWLSHNTDV DDKVASWWDY GYQTTAMANR 600 TVIVDNNTWN NTHIATVGTA MSSPEKAAWE IFNSLDVKYV LVVFGGLVGY PSDDINKFLW 660 MVRIGGGVFP HIKEPDYLRD GQYRVDAQAT PTMLNCLMYK LCYYRFVETD GKGFDRVRGY 720 EIGKKHFKLT HFEEVFTTHH WMVRIYKLKP QKNRVRGKLK KLKSNAKTSS TLAAGRKKNP 780 WQ* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1287 | COG1287 | 1.0e-10 | 560 | 756 | 222 | + Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only] | ||
| TIGR04154 | archaeo_STT3 | 6.0e-11 | 30 | 288 | 286 | + oligosaccharyl transferase, archaeosortase A system-associated. Members of this protein family occur, one to three members per genome, in the same species of Euryarchaeota as contain the predicted protein-sorting enzyme archaeosortase (TIGR04125) and its cognate protein-sorting signal PGF-CTERM (TIGR04126). | ||
| pfam02516 | STT3 | 2.0e-28 | 533 | 708 | 185 | + Oligosaccharyl transferase STT3 subunit. This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes, OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone, rather than in an OTase complex, and is required for N-glycosylation of asparagines. | ||
| COG1287 | COG1287 | 3.0e-44 | 25 | 436 | 429 | + Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only] | ||
| pfam02516 | STT3 | 2.0e-77 | 24 | 436 | 426 | + Oligosaccharyl transferase STT3 subunit. This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes, OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone, rather than in an OTase complex, and is required for N-glycosylation of asparagines. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004576 | oligosaccharyl transferase activity |
| GO:0006486 | protein glycosylation |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACL54353.1 | 0 | 1 | 782 | 1 | 753 | unknown [Zea mays] |
| GenBank | EEC79544.1 | 0 | 13 | 782 | 340 | 1119 | hypothetical protein OsI_20658 [Oryza sativa Indica Group] |
| RefSeq | NP_001056068.1 | 0 | 1 | 782 | 1 | 787 | Os05g0519900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002441399.1 | 0 | 16 | 782 | 16 | 782 | hypothetical protein SORBIDRAFT_09g025920 [Sorghum bicolor] |
| RefSeq | XP_002456347.1 | 0 | 66 | 782 | 1 | 705 | hypothetical protein SORBIDRAFT_03g034385 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2lgz_A | 0 | 537 | 780 | 20 | 267 | A Chain A, Solution Structure Of Stt3p |
| PDB | 3vu0_C | 0.00004 | 566 | 682 | 6 | 123 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vu0_B | 0.00004 | 566 | 682 | 6 | 123 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vu0_A | 0.00004 | 566 | 682 | 6 | 123 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
